CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTGAAGTCTCAGTGCTCTTATTAATCTTTTTATAAACCATCTTG
AACATATCTGCTTAATATATTTTCCTAAAGTTAATGAATGCTGAAAAAAT
AATGAAATTATTATATATAAATGGAAAAACATAGACAAAAATCTGAAAAT
ACTACTTGAATAACCCTGTCACAGAAATTCATCCATGAAAGAAAAATTTC
AGTAAGACAATTTCTTCCCACCATTCTCTCATTTTTTCTTCACCCCTCCT
TTCTTTGGGTATAAAAAGTGTAACTAAAAACCCATATTATTTGCAATATA
TTGCACTATAAACAATGTACAGAGAAGTAATCTAGGCAGTTTGTTTAATA
CATGTATTACTAATGGCCCTCTAAAGTAACAAAACTGAAATAATGAAGAT
ATTGTGGAGTTTATTACAATGATTTATAGCATGTTGTTCATTTGGGTGTC
TCACAATTCCAAATCTGTTGTTGGAGTCCCAAAGGACTCCACATAAATAA
TAATAGATCTATGTAAATATAAAAAAAAGATCTTAGGCCCTCTACTTCAT
CACTAAAATTATCTCCACTAACCACCGTTCCCACTTACCCCTATTTATCC
TTTTATTGTTTACACCTTTTACACCCCTATATCTATTACCTAAGGTATTT
TAATTATGTACCATTTCCCCCATCTTACCAATTGTTTTCTCTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACCAGAAGCTCTCCCATCTCTGGC
TCTTGTATCATCTTTCTTCCTTTCCTATAATAGTCAGCTCTACCCAAGTC
TTGTTTTACCACCTTGACTGACCAGCAGGACCCTCAGGTGCCTGTAGAAA
TTGTGGAAGTGGCCCAACTAATGACTAGTCCAGATTTAGCCTCATACCTT
GACTGGGAGCCCAGTCCTGACACTCTGAGCCAAGACCCTATGCTCAATAA
CCCAATAGCCCAGAGACCTAGGACAGAATCAAACACAACTGACAAAAACA
AACAAACAAACAAAAAGTCAATGAAATGACTTGTAATGATATTCTGGTAT
GCTCATAGATTGGTGCATACACTTATTGTCATCAGAGAGGTTTCACCTAG
CAATTGAGGGAAACAGGTGCAGAGGCACACAGAGAAACATTAAATAGAGT
TGTAGGAATACAGATGAAGAGGAGGAGGAAGGATTATAGAACCTAGAGGG
CTCATAGGTATTCACAGAGACTGATTCAGCAACCTGTGAGCCTGCATGGG
ACTGATCTATTATATCACATACGTTACCGCTGTGCATCTTTGTTTTTGTC
GCTATCTTATTATTCCCCCGCCCTTTTGCCACCTTTTTTATCGCTTTTCT
ACTTTCCCATTCCCCTCTCCCTTATTTCTTTTCCC

Query= MSMg01no179_k09.b1 MSMg01no179_k09.b1 CHROMAT_FILE:
MSMg01no179_k09.b1 PHD_FILE: MSMg01no179_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:42 2005
         (494 letters)



>mm_chr14_95691426_95692319
          Length = 894

 Score =  874 bits (452), Expect = 0.0
 Identities = 479/488 (98%), Gaps = 3/488 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtgaagtctcagtgctcttattaatctttttataaaccatcttgaacatatct 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 206 gaattcagtgaagtctcagtgctcttattaatctttttataaaccatcttgaacat-tct 264

                                                                       
Query: 65  gcttaatatattttcctaaagttaatgaatgctgaaaaaataatgaaattattatatata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcttaatatattttcctaaagttaatgaatgctgaaaaaataatgaaattattatatata 324

                                                                       
Query: 125 aatggaaaaacatagacaaaaatctgaaaatactacttgaataaccctgtcacagaaatt 184
           |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 325 aatggaaaaacatagacaaaaatctgaaaatactactttagtaaccttgtcacagaaatt 384

                                                                       
Query: 185 catccatgaaagaaaaatttcagtaagacaatttcttcccaccattctctcattttttct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catccatgaaagaaaaatttcagtaagacaatttcttcccaccattctctcattttttct 444

                                                                       
Query: 245 tcacccctcctttctttgggtataaaaagtgtaactaaaaacccatattatttgcaatat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcacccctcctttctttgggtataaaaagtgtaactaaaaacccatattatttgcaatat 504

                                                                       
Query: 305 attgcactataaacaatgtacagagaagtaatctaggcagtttgtttaatacatgtatta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attgcactataaacaatgtacagagaagtaatctaggcagtttgtttaatacatgtatta 564

                                                                       
Query: 365 ctaatggccctctaaagtaacaaaactgaaataatgaagatattgtggagtttattacaa 424
           ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctagtggttctctaaagtaacaaaactgaaataatgaagatattgtggagtttattacaa 624

                                                                       
Query: 425 tgatttatagcatgttgttcatttgggtgtctcacaattccaaatctg-ttgttggagtc 483
           |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 625 tgatttatagcatgttgttcatttgggtgtctcacaattccaaatctggtt-ttggagtc 683

                   
Query: 484 ccaaagga 491
           ||||||||
Sbjct: 684 ccaaagga 691


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)