Query= MSMg01no179_m10.b1 MSMg01no179_m10.b1 CHROMAT_FILE:
MSMg01no179_m10.b1 PHD_FILE: MSMg01no179_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
(312 letters)
>mm_chr14_26256312_26257023
Length = 712
Score = 456 bits (236), Expect = e-133
Identities = 283/308 (91%), Gaps = 15/308 (4%)
Strand = Plus / Minus
Query: 5 gaattccagcatggttacgaccacataaagacacaccatctcaataaaataaaataaaat 64
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gaattccagcatggttaggatcacataaagacacaccatctcaataaaataaaataaaat 531
Query: 65 aaaataaaataaaaataaaaataaaataaaatagcatttcctggattgtcagttcattta 124
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaaat---------------ataaaataaaatagcatttcctggattgtcagttcattta 486
Query: 125 atccccaccaacctaatgagggagggttgtttaaagaactagaggcacaggaatggctca 184
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 atcctcaccaacctgatgagggagggttgtttaaagaactagaggcacaggaatggctca 426
Query: 185 acaacgaggctaaataaccctctccaggtctcacggtaaagacatgaagacgggggttac 244
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 425 acaatgaggctaattaaccctctccaggtctcacggtaaagacatgaagacggggtttac 366
Query: 245 agtccagttttctgactgactgaatgtatatgcacaggtatgggggcttcctgactgtaa 304
|| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 365 agcccagttttctgactgactgaatgtagatgcacaggtatgggggcttccagactgtaa 306
Query: 305 ccatggca 312
||||||||
Sbjct: 305 ccatggca 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no179_m10.g1 MSMg01no179_m10.g1 CHROMAT_FILE:
MSMg01no179_m10.g1 PHD_FILE: MSMg01no179_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:52 2005
(343 letters)
>mm_chr14_26087289_26088031
Length = 743
Score = 656 bits (339), Expect = 0.0
Identities = 342/343 (99%)
Strand = Plus / Plus
Query: 1 tccttccctgggccaggtacctcagagtcagggaaagctatacaaggaatagaatggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccttccctgggccaggtacctcagagtcagggaaagctatacaaggaatagaatggata 260
Query: 61 caccaaagtgcaatgccagctctatgtgaggagaaacagtgggtcaaggtgagagaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caccaaagtgcaatgccagctctatgtgaggagaaacagtgggtcaaggtgagagaccac 320
Query: 121 tcgggaatgcggaaagaggccaagggtacagaggaaggcaggcagtggggtgtgtcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgggaatgcggaaagaggccaagggtacagaggaaggcaggcagtggggtgtgtcattc 380
Query: 181 agtggaggagaacacagcttctgtgcaaaaaccagctccaaggccagcagtcagaccaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtggaggagaacacagcttctgtgcaaaaaccagctccaaggccagcagtcagaccaga 440
Query: 241 aggcctctgaggtggcctcttttaggccatttgggacatctttgaggcgtgggcgggagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcctctgaggtggcctcttttaggccatttgggacatctttgaggcgtgggcgggagc 500
Query: 301 ctgtttgaaccttcttggccctgtattggaggcaggaattaaa 343
||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 ctgtttgaaccttctcggccctgtattggaggcaggaattaaa 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
