XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CATTACACATAACTACATAAATGGTAACACTGGGGGAAGCCTGAAAAAAT
AGTGCTTTCCATTGTATTAAAAATTATGCTACTAAAATGTTTTAGATGTC
TTGAGCTTTCTACAAATAGAGAATAAAATATTTCTGGGATAGAAGATTAG
TACTACTACTTCCTCACATGTAGTAGCTGTGTGATTTACTCATGTGGAAG
CTCGTTTGCAGGAACAAAATTATCACTCAAATTTTTAAAGAGTCTTACTT
TATGTTCCACACAGCTTTTTTACTTTATGTTCATCACACATAGTGATGAA
CTGTGGCCAATTACATGGAAAAAATAAGATACACTTTTACCTCTATCATT
ATGAGACAGTCATATTGGAAAATTAACATGAAAGATCTTTATTACTATTC
TTTAGTATATTAATAAATATTTTCACAGAGAGACATGTTTATATTTTATA
TCTTGCACTGTTTTCATATATTTTATCATAAACCCTTCAAAATATGAACA
CACATTCATAATTAAATATTTTATATTTTTCATAATTAAGTTATAAGTGA
ATATACAAACACCTATATTTTATTTCAAATGTTGAACTTTAGTAAGGCAT
ATCATCCAACATTAACTCAGGAATATAATCATATATTCAAATAACTCCTG
TGTCAGTTAAGCAACACATTTA

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCAGGCTAAGAACTGGGAAAAAGGAGACAGA
GAATCTTCATAACTCCAGGGATAGAAATGGATCATATTTAGAGCTGCAGA
GGGAAGATCATCTGAAATGTAGTTGGAAGGGGAAAGTGGTCACCAGAAGG
GCTGCACAGAAACATTTTGGGCAGCACAGACTAATGACCTTCACCAAAGG
TAACAGGGTAGAAAGTGAAAGGTAGATTTAGAAGGTGTTGAGCCAGGAGT
ACCTGAGAGAACATACGCTAGCAGTGGGAGGATTAGAACTTTCCAGTCTT
AGAACAGTAAAAATATTTCAAAAATAATCTACCTTGTGTTTGTGTGTGTG
TTTCACTCATGGATACAAAGAGCTTCTGGGTAAGTGGGTGGAAGTGTGAC
CTACTGGTACTGCATAGCAGGATAGCTAACACTCACCAGGACTATTTACA
GAGAAATAATGACAATACCAGCCATTTACATTTGATGAAAATTACTTTTC
ACAGGTTTAGTTATTTTTTCGCGAAGGCCCGCTTATTCGCCAAACGGACA
CAGTTTATAATCTCCATTTATAATCCCCACCCCCCACCTATACTTCTCTT
ATTGGCCGCCCTATGCCCCCCTCCCTCTCTTTTTTTTTCCATTAACATTT
CTCCCCCTCTTGTCCTGTCGCTTCC

Query= MSMg01no179_p02.b1 MSMg01no179_p02.b1 CHROMAT_FILE:
MSMg01no179_p02.b1 PHD_FILE: MSMg01no179_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:04 2005
         (683 letters)



>mm_chr14_83308284_83309364
          Length = 1081

 Score = 1166 bits (603), Expect = 0.0
 Identities = 660/679 (97%), Gaps = 2/679 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacattacacataactacataaatggtaacactgggggaagcctgaaaaaatagt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 716 gaattcacattacacataactacataaatggtaacactgggggaagcct-aaaaaatagt 658

                                                                       
Query: 65  gctttccattgtattaaaaattatgctactaaaatgttttagatgtcttgagctttctac 124
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 gctttccgttgtattaaaaattatgctactaaaatgttttagatgtcttgagctttctac 598

                                                                       
Query: 125 aaatagagaataaaatatttctgggatagaagattagtactactacttcctcacatgtag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aaatagagaataaaatatttctgggatagaagattagtactactacttcctcacatgtag 538

                                                                       
Query: 185 tagctgtgtgatttactcatgtggaagctcgtttgcaggaacaaaattatcactcaaatt 244
           ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 537 tagctgtgtaatttactcatgtggaagctcatttgcaggaacaaaattatcactcaaatt 478

                                                                       
Query: 245 tttaaagagtcttactttatgttccacacagcttttttactttatgttcatcacacatag 304
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 477 tttaaagagtcttactttatgttccacacagcttttttactttattttcatcacacatag 418

                                                                       
Query: 305 tgatgaactgtggccaattacatggaaaaaataagatacacttttacctctatcattatg 364
           | || |||||||| |||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 417 taataaactgtggtcaattatatggaaaaactaagatacacttttacctctatcattatg 358

                                                                       
Query: 365 agacagtcatattggaaaattaacatgaaagatctttattactattctttagtatattaa 424
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 357 agacagtcatattggaaaattaacatgaaagatctttattaaaattctttagtatattaa 298

                                                                       
Query: 425 taaatattttcacagagagacatgtttatattttatatcttgcactgttttcatatattt 484
           ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 297 taaatattttcacag-gagacatgcttatattttatatcttgcactgttttcatatattt 239

                                                                       
Query: 485 tatcataaacccttcaaaatatgaacacacattcataattaaatattttatatttttcat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tatcataaacccttcaaaatatgaacacacattcataattaaatattttatatttttcat 179

                                                                       
Query: 545 aattaagttataagtgaatatacaaacacctatattttatttcaaatgttgaactttagt 604
           |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 178 aattaagttatacgtgaatatacaaacacctatattttacttcaaatgttgaacttcagt 119

                                                                       
Query: 605 aaggcatatcatccaacattaactcaggaatataatcatatattcaaataactcctgtgt 664
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 118 aaggcatatcatccaacattaactcaggaatataatcatatcttcaaataactcctatgt 59

                              
Query: 665 cagttaagcaacacattta 683
           |||||||||||||||||||
Sbjct: 58  cagttaagcaacacattta 40


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1081
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1071
Effective search space:   720783
Effective search space used:   720783
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)