XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACTATGTACATCTGGGTGGCCTTGCAAGAGATCTACTTCTCTCTGCCTAC
CAAGTTCTGGGACTAACGGCATGAGCCACCACACCTGGCCTGATTTGAAA
CTGATGCGGTTAAAAATACCAGTGAAATCAATTTTGTTAATAATGTAGCA
AGTGGAACATTTAAGTTGTACACTGTAGTTAGCCATATATGTTTTTACTT
GACAGAACTGAATGCACCTCACGAAAACTTCTCAAGGGCTTCAAAAGAGA
GGTAAACATTCTTCCCAATTCTATTGTCCTGCTCATCCCTTGTGTTTCAT
TCCTCCTTGTTGACCAGGATTCGGTAAATCCTTCTGCTTCATTGCCATAG
AGCAGAGACACCCCTGGAAGTCCAGATTCTGAGGATGTAAGCAGAGGCCC
GCGACCAGCAAGTGCAAATCCTACTCCTGTGAGATTCCAGTTGCATGCCA
CAGCTAAACACCTTAGATCTGTCTTTTTTCGCTCTCTTTTTTCCTCTCTC
TCTCTCTCTTTCTTTCTTTCTTGGTTGTGCGTGGGCCTGTGACTTATTTC
CTATTTTGGTCTCGAAAATTGATGGGGCGGTGCACCCGGGATAAACTTTT
CCGAGGAAGCAAAGTAAGTTTGGCAGACGGTAGAACGGATGATAAAATTC
CTGAAGGTAACCTGTN

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXACAGAACAACTCCTGGAGTTGTTGGTTGC
CTTCTACCTTGTTTGAGGAAGGATATTTCTTGTTATTTATATCTCATCGT
GCAACCCAGGCTAAGTGGTCCACAACTTTCTAGGCAATCTTTTTCTCTCT
ACCTCCCCACTTGGCATAAGAGCAATGAAACTACAGACGTGTACTATAGA
ATTGGATTCCAGGAAAATTTAGGTCATCAGGGCTTGCCAGATAAGCAATT
TTACCCACAGAGCCACCTCATGAGGTTTCTTTAGAAGATTTATTTTTATG
TTTATAAGTATTCATTCTGCACATATTCATATACAGGTGTCATGTTCATG
CCTGGTGCCATGCAGATCAGAATAGGGTGTCATATCCCTTTGAGTTGAAG
TTAGATAGTTCTGAGTAGCCATGTGTGTGCTGAAAACTACAACTGGAGTC
CTCCAGAAGACAGCAGTTAAGTGTTGCTGAGCCATCTTTTTACCTGCTTT
TTTTTTTTTTAAATCAGAATTTATTTGGAGGAGAGGCATTGTTTTGTTTT
GCTTTTCGCGCAAAATAATAATAAATAGACCTAGCTCCTTACCAACGACC
TCTACACCTGAACCCCCCTCGTGGATAACAAATTAATACGTATATATATT
CTATTCTATTTCTCGTCCG

Query= MSMg01no180_j04.b1 MSMg01no180_j04.b1 CHROMAT_FILE:
MSMg01no180_j04.b1 PHD_FILE: MSMg01no180_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:51 2005
         (584 letters)



>mm_chr14_21460478_21461457
          Length = 980

 Score = 1054 bits (545), Expect = 0.0
 Identities = 570/581 (98%), Gaps = 6/581 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcactatgtacatctgggtggccttgcaagagatctacttctctctgcctaccaa 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 ggaattcactatgtagatctgggtggccttgcaagagatctacttctctctgcctaccaa 724

                                                                       
Query: 64  gttctgggactaacggcatgagccaccacacctggcctgatttgaaactgatgcggttaa 123
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gttctgggactaaaggcatgagccaccacacctggcctgatttgaaactgatgcggttaa 664

                                                                       
Query: 124 aaataccagtgaaatcaattttgttaataatgtagcaagtggaacatttaagttgtacac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 aaataccagtgaaatcaattttgttaataatgtagcaagtggaacatttaagttgtacac 604

                                                                       
Query: 184 tgtagttagccatatatgtttttacttgacagaactgaatgcacctcacgaaaacttctc 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 603 tgtagttagccatatatgtttttacttgacagaactgaatgcacctcacgaaaatttctc 544

                                                                       
Query: 244 aagggcttcaaaagagaggtaaacattcttcccaattctattgtcctgctcatcccttgt 303
           |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aagggcttc----gagaggtaaacattcttcccaattctattgtcctgctcatcccttgt 488

                                                                       
Query: 304 gtttcattcctccttgttgaccaggattcggtaaatccttctgcttcattgccatagagc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gtttcattcctccttgttgaccaggattcggtaaatccttctgcttcattgccatagagc 428

                                                                       
Query: 364 agagacacccctggaagtccagattctgaggatgtaagcagaggcccgcgaccagcaagt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agagacacccctggaagtccagattctgaggatgtaagcagaggcccgcgaccagcaagt 368

                                                                       
Query: 424 gcaaatcctactcctgtgagattccagttgcatgccacagctaaacaccttagatctgtc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 367 gcaaatcctactcctgtgagattccagttgcatgccacagctaaacaccttaggtctgtc 308

                                                                       
Query: 484 ttttttcgctctcttttttcctctctctctctctctttctttctttcttggttgtgcgtg 543
           ||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||
Sbjct: 307 ttttttcgctctcttttttc--ctctctctctctctttctttctttcttgtttgtgcgtg 250

                                                    
Query: 544 ggcctgtgacttatttcctattttggtctcgaaaattgatg 584
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggcctgtgacttatttcctattttggtctcgaaaattgatg 209


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 980
Length adjustment: 10
Effective length of query: 574
Effective length of database: 970
Effective search space:   556780
Effective search space used:   556780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)