Query= MSMg01no183_e21.b1 MSMg01no183_e21.b1 CHROMAT_FILE:
MSMg01no183_e21.b1 PHD_FILE: MSMg01no183_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:17 2005
(373 letters)
>mm_chr14_101485976_101486747
Length = 772
Score = 679 bits (351), Expect = 0.0
Identities = 363/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Minus
Query: 5 gaattccttcccccaaagcatcaaaaggcctaccccttgcatgtcacattgcttcttttc 64
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 570 gaattcctt-ccccaaagcatcaaaaggcctaccccttgcacgtcacattgcttcttttc 512
Query: 65 tgggttcttgattaaatgatcctgatcaaaagactgttccttttatctctcgtgtcctaa 124
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 511 tgggttcttgattaaatgatcctgatcaaaagactgttccttttgtctctcgtgtcctaa 452
Query: 125 tgacatacttaattttcttttacgcacttcaaaaagaattcttttgtatgaggtgatgta 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 451 tgacatacttaattttcttttatgcacttcaaaaagaattcttttgtatgaggtgatgta 392
Query: 185 taaaaatcccattagagaattattttaaaagaataaaatctttgacccctgtaaaatttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 taaaaatcccattagagaattattttaaaagaataaaatctttgacccctgtaaaatttg 332
Query: 245 tggagagaaaagaatttatataaaaaaagactttggcctttagtctacagttgaaaagct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tggagagaaaagaatttatataaaaaaagactttggcctttagtctacagttgaaaagct 272
Query: 305 gttcagatggtttagggcagttgagcttttgcttttatgaggactgattactgcttggac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gttcagatggtttagggcagttgagcttttgcttttatgaggactgattactgcttggac 212
Query: 365 tatcttg 371
|||||||
Sbjct: 211 tatcttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 772
Length adjustment: 9
Effective length of query: 364
Effective length of database: 763
Effective search space: 277732
Effective search space used: 277732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_e21.g1 MSMg01no183_e21.g1 CHROMAT_FILE:
MSMg01no183_e21.g1 PHD_FILE: MSMg01no183_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:17 2005
(573 letters)
>mm_chr14_101397249_101398222
Length = 974
Score = 1025 bits (530), Expect = 0.0
Identities = 561/572 (98%), Gaps = 3/572 (0%)
Strand = Plus / Plus
Query: 2 cacaaccatataatctatgggctctaggatattgttttatttatgcgcaccagcacgggg 61
||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 202 cacaaccatataatctatgggctctaggatattgttttatttatg-ggaccaggacgggg 260
Query: 62 ctcgcttctttcttataagtagatcagatttctgtgctatctgattagcatttgttttcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcgcttctttcttataagtagatcagatttctgtgctatctgattagcatttgttttcc 320
Query: 122 tctc--tttttttttttgcttatgttttgtttccttatgaaagaaatattcctataacat 179
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctttttttttttttgcttatgttttgtttccttatgaaagaaatattcctataacat 380
Query: 180 gtatctggtttacaaaatgaaaccagatgctactctaaagaattatccagaataactact 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gtatctggtttacaaaatgaaaccagatgctactctaaagaattatccagaagaactact 440
Query: 240 ggtaaatttttatttattcaccatccaagatatgactcaggtatccttgtttatgcattt 299
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ggtaaatttttatttattcaccatccaagatatgattcaggtatccttgtttatgcattt 500
Query: 300 atgaaatgtggataaaaggtcaattattgaaaaggatgctaacaacctaaatttaatgct 359
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 atgaaatatggataaaaggtcaattattgaaaaggatgctaagaacctaaatttaatgct 560
Query: 360 ataaatacatcttcatagttctttaaactcattggatttctaacctgcttggtgcaagta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaatacatcttcatagttctttaaactcattggatttctaacctgcttggtgcaagta 620
Query: 420 ccaatagccaaagtgatagcttttgattttctattagcttgtcaaagtagtatttgtgcc 479
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaataactaaagtgatagcttttgattttctattagcttgtcaaagtagtatttgtgcc 680
Query: 480 ccatgtaatacttcatctctaccttgataaactctacctttcaaagcaagtgaaactcac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatgtaatacttcatctctaccttgataaactctacctttcaaagcaagtgaaactcac 740
Query: 540 taaagtagactgaaagggacgctgtgatgtga 571
||||||||||||||||||||||||||||||||
Sbjct: 741 taaagtagactgaaagggacgctgtgatgtga 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 974
Length adjustment: 10
Effective length of query: 563
Effective length of database: 964
Effective search space: 542732
Effective search space used: 542732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
