Query= MSMg01no185_b22.b1 MSMg01no185_b22.b1 CHROMAT_FILE:
MSMg01no185_b22.b1 PHD_FILE: MSMg01no185_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(308 letters)
>mm_chr14_98693755_98694462
Length = 708
Score = 549 bits (284), Expect = e-161
Identities = 299/308 (97%), Gaps = 8/308 (2%)
Strand = Plus / Minus
Query: 5 gaattcagaaggcatattgaaatctttacattgttttaaagaaaattatcaatgattaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaattcagaaggcatattgaaatctttacattgttttaaagaaaattatcaatgattaaa 449
Query: 65 ttgttaaagcatagttacactcagaggaattggaatgtttggtctggaatggacacggtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttgttaaagcatagttacactcagaggaattggaatgtttggtctggaatggacacggtg 389
Query: 125 aaattttgacttaattttgaaaaaatgagtcaaatcacatagtgaagtcattttaaattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaattttgacttaattttgaaaaaatgagtcaaatcacatagtgaagtcattttaaattt 329
Query: 185 ccacctgggtttagacaagacagaaattctcatttccttagtcattgtcctgtgggtttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ccacctgggtttagacaagacagaaattctcatttccttagtcattgtcctgtgggtttt 269
Query: 245 gtctttttgcaatgaaaatttggatttcaaa----aggttttatcctcacagaaggcttt 300
||||||||||||||||||||||||||||||| ||| | ||||||||||||||||
Sbjct: 268 gtctttttgcaatgaaaatttggatttcaaaaggcagg----aacctcacagaaggcttt 213
Query: 301 catagaca 308
||||||||
Sbjct: 212 catagaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_b22.g1 MSMg01no185_b22.g1 CHROMAT_FILE:
MSMg01no185_b22.g1 PHD_FILE: MSMg01no185_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:45 2005
(220 letters)
>mm_chr14_98533108_98533727
Length = 620
Score = 402 bits (208), Expect = e-117
Identities = 217/220 (98%)
Strand = Plus / Plus
Query: 1 acaattaaacctgttcaatgcacccagagatatttagattattcttatacaatgatttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acaattaaacctgttcaatgcacccagagatatttagattattcttatacaatgatttca 260
Query: 61 aagaaggattgttattctcaattattgtcacatggataaagtgccctggtatgctagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagaaggattgttattctcaattattgtcacatggataaagtgccctggtatgctagact 320
Query: 121 tactgttggcgttcagaacaaatttttcttatgtagcccaggttgttatacagcttagat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactgttggtgttcagaacaaatttttcttatgtagcccaggttgttatacagcttagat 380
Query: 181 ttgctcataatttttagacctcctctcagcctctggagtg 220
||||||| |||||| |||||||||||||||||||||||||
Sbjct: 381 ttgctcagaattttcagacctcctctcagcctctggagtg 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
