Query= MSMg01no186_p19.b1 MSMg01no186_p19.b1 CHROMAT_FILE:
MSMg01no186_p19.b1 PHD_FILE: MSMg01no186_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:09 2005
(315 letters)
>mm_chr14_78372442_78373157
Length = 716
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 5 gaattcttgttccttgttcaa-ccataatatttaactacattcttctttgctccctggat 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgttccttgttcaaaccataatatttaactacattcttctttgctccctggat 264
Query: 64 ctgatgtggaatatttgtgactaagattgactgtctctaatgtaaatggctccctggatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgatgtggaatatttgtgactaagattgactgtctctaatgtaaatggctccctggatc 324
Query: 124 tgatatggaatatttgtgactaagattgactttctctaatgtaatggaaggggcatgaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgatatggaatatttgtgactaagattgactttctctaatgtaatggaaggggcatgaga 384
Query: 184 gagccgctatccacctgctgtggcttatcacaactccgtagtttgggcatatagataaga 243
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 gagccgctatccacctgctgtggcttatcacaactccgtagtttgggcgtatagataaga 444
Query: 244 gaaagtcctggtgtgcaggttgcttatgtgataaagtaggttttgggcatgtgcaggatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaagtcctggtgtgcaggttgcttatgtgataaagtaggttttgggcatgtgcaggatt 504
Query: 304 tctgaacacaca 315
||||||||||||
Sbjct: 505 tctgaacacaca 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_p19.g1 MSMg01no186_p19.g1 CHROMAT_FILE:
MSMg01no186_p19.g1 PHD_FILE: MSMg01no186_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:09 2005
(289 letters)
>mm_chr14_78450893_78451580
Length = 688
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 agttcttaaaagactacccagcaaagaggaggtctgtggtgtttaagctgaataaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 488 agttcttaaaagactacccagcaaagaggaggtctgtggtgtttaagctgaat-aaaaac 430
Query: 61 ctcatgattccttttcacaagattcagcctggaatggacacataaacagtggcatggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ctcatgattccttttcacaagattcagcctggaatggacacataaacagtggcatggaga 370
Query: 121 aacctacagatagacaaagacacagaggaagagacacagagacaggaacaggaaggagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aacctacagatagacaaagacacagaggaagagacacagagacaggaacaggaaggagag 310
Query: 181 atgcttctacaagcaaaagaataccatcagtcactagacgtgggaacagaagacattgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atgcttctacaagcaaaagaataccatcagtcactagacgtgggaacagaagacattgag 250
Query: 241 ttcaacctcaggacactgactctggacttccagcctccagggctgtaga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcaacctcaggacactgactctggacttccagcctccagggctgtaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
