Query= MSMg01no188_c21.b1 MSMg01no188_c21.b1 CHROMAT_FILE:
MSMg01no188_c21.b1 PHD_FILE: MSMg01no188_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:44 2005
(317 letters)
>mm_chr14_67494518_67495234
Length = 717
Score = 580 bits (300), Expect = e-170
Identities = 309/314 (98%), Gaps = 4/314 (1%)
Strand = Plus / Plus
Query: 4 ggaattcactatctacctaacaaggccagtgctcagcaagaaagtaatatggcctggaga 63
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaattcacta----cctaacaaggccagtgctcagcaagaaagtaatatggcctggaga 263
Query: 64 gtaccaagttcctgggatggaatcacatgtacctactctttctcccttgcccccatttgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtaccaagttcctgggatggaatcacatgtacctactctttctcccttgcccccatttgg 323
Query: 124 ccttttagagacgggatttcaccattagagctcagcttgccttggactcttggtccttct 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 ccttttagagacgggatttcaccattagagctcagcttgccttgaactcttggtccttct 383
Query: 184 gccttggccactcgagtgctgggattacagatgagtatcactccagagcagagttctcgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccttggccactcgagtgctgggattacagatgagtatcactccagagcagagttctcgt 443
Query: 244 ctcccctccaatcaggtaggaagaggttgttcaactgaggattattccagaatttgtatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctcccctccaatcaggtaggaagaggttgttcaactgaggattattccagaatttgtatt 503
Query: 304 tgctcccattcctt 317
||||||||||||||
Sbjct: 504 tgctcccattcctt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_c21.g1 MSMg01no188_c21.g1 CHROMAT_FILE:
MSMg01no188_c21.g1 PHD_FILE: MSMg01no188_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:44 2005
(280 letters)
>mm_chr14_67615449_67616128
Length = 680
Score = 534 bits (276), Expect = e-156
Identities = 279/280 (99%)
Strand = Plus / Minus
Query: 1 atcttcccagggtcagcttagttcaggttcctaaatatgatgaggaatggcaaaggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 atcttcccagggtcagcttagttcaggttcctaaatatgatgaggaatggcaaaggggct 601
Query: 61 ccctggccagctagtcctgctgggacagtgggtccagttagagacactaccttacaaaat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 600 ccctggccagctagtcctgctgggacagtgggtccagttagaggcactaccttacaaaat 541
Query: 121 aagatggagaacaaagaggaaagtagtgagagtcactttcagcttctacagagacataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 aagatggagaacaaagaggaaagtagtgagagtcactttcagcttctacagagacataca 481
Query: 181 tttgaacctgcacagatgtgtacaccaaacacacataacacaacactgctacaaaatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tttgaacctgcacagatgtgtacaccaaacacacataacacaacactgctacaaaatagg 421
Query: 241 tgccttcaatatttgtgtcatttgacttataattggttat 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgccttcaatatttgtgtcatttgacttataattggttat 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
