Query= MSMg01no193_d22.b1 MSMg01no193_d22.b1 CHROMAT_FILE:
MSMg01no193_d22.b1 PHD_FILE: MSMg01no193_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:33 2005
(242 letters)
>mm_chr14_100492083_100492724
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Minus
Query: 1 attatccctggaactatgtctgattctcatctcagactctgaacgtctttgtgactctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attatccctggaactatgtctgattctcatctcagactctgaacgtctttgtgactctgt 383
Query: 61 ccttcattatggagtatttttaaatgtacctaaaatagatctgtgtagcaatttgtttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccttcattatggagtatttttaaatgtacctaaaatagatctgtgtagcaatttgtttac 323
Query: 121 agtactggaacatggggtgagatggctcacaatcttccttaaggatgatagtatttaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agtactggaacatggggtgagatggctcacaatcttccttaaggatgatagtatttaatg 263
Query: 181 tagcttatcgatgtcatcagctggagagttggatttttctagttgcaggttagggaggga 240
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 tagtttatcgatgtcatcagctggagagttggatttttctaattgcaggttagggaggga 203
Query: 241 gg 242
||
Sbjct: 202 gg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no193_d22.g1 MSMg01no193_d22.g1 CHROMAT_FILE:
MSMg01no193_d22.g1 PHD_FILE: MSMg01no193_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:33 2005
(586 letters)
>mm_chr14_100333071_100334056
Length = 986
Score = 1075 bits (556), Expect = 0.0
Identities = 572/582 (98%), Gaps = 8/582 (1%)
Strand = Plus / Plus
Query: 1 taggagaatggacaaaggattccaggagaatggatagaggattccaggacactgggcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 taggagaatggacaaaggattccaggagaatggatagaggattccaggagaatgggcagt 260
Query: 61 ggattccagcagagcaggcagctaattagctgtgaatatatatagtgaggaccaacgata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattccagcagagcaggcagctaattagctgtgaatatatatagtgaggaccaacgata 320
Query: 121 ctgtgttgttgtagatattttgataaatacatcatctattgccctttttcagatagtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgttgttgtagatattttgataaatacatcatctattgccctttttcagatagtaaa 380
Query: 181 agatacatattattaggatgttttgctatgccaagacatgtaatagttagttttaggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatacatattattaggatgttttgctatgccaagacatgtaatagttagttttaggtaa 440
Query: 241 ataatcaagaaactttataaagaccagcggtcagataaaaccgtcattaataatttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatcaagaaactttataaagaccagcggtcagataaaaccgtcattaataatttgaaa 500
Query: 301 gtactttttattgaaacgcttgattacttggctgtcttgtgtccacagagactcctctgt 360
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtact--------aaacgcttgattacttggctgtcttgtgtccacagagactcctctgt 552
Query: 361 gcatgcgaaaactgggagtgggggtagatgtagatcaggacaaaattatagtccatggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gcatgcgaaaactgggagtgggggtagatgtagatcaggacaaaattatagtccatggaa 612
Query: 421 cgtccctactggtaggccttttggagttattactgcacgcaccgttcccagcatcttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgtccctactggtaggccttttggagttattactgcacgcaccgttcccagcatcttcat 672
Query: 481 agatatagtgagagttttgattggcttcccattgtagttgttcttctctcaaatacttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 agatatagtgagagttttgattggcttcccattgtagttgttcttctctcaaatacttat 732
Query: 541 atggaacatagctcgttctctttctctctgtctgtctgtctg 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 atggaacatagctcgttctctttctctctgtctgtctgtctg 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
