Query= MSMg01no193_n23.b1 MSMg01no193_n23.b1 CHROMAT_FILE:
MSMg01no193_n23.b1 PHD_FILE: MSMg01no193_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:32 2005
(321 letters)
>mm_chr14_93211579_93212295
Length = 717
Score = 561 bits (290), Expect = e-164
Identities = 308/316 (97%), Gaps = 4/316 (1%)
Strand = Plus / Minus
Query: 5 gaattctagatgttaatactgagactcttatcatgagcatatagtacacaatatcaaaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaattctagatgttaatactgagactcttatcatgagcatatagtacacaatatcaaaac 579
Query: 65 tatataagaccattttagaaattgttagaagttgttccttaaacttcaatctaaaactga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 578 tatataagaccattttagaaattgttagaagttgttccttaaacttcaatctaaaacaga 519
Query: 125 taatatgtatataagtatatatgtttatattcttttacttcataaacacacacacacact 184
| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 518 ttatatgtatatatgtatatatgtttatattcttttacttcataa----acacacacact 463
Query: 185 atatgtttgtgtttatgaagtaaaagtcaggaattcaaataataaattttagaaccaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 atatgtttgtgtttatgaagtaaaagtcaggaattcaaataataaattttagaaccaaat 403
Query: 245 attgtgaagcagtacaatccagttatataacaaattgatacatttgtactgatcactagt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 402 attgtgaagcagtacaatccagttatataacaaattgatacatttgtactgatcactact 343
Query: 305 agtaagaaaatattaa 320
||||||||||||||||
Sbjct: 342 agtaagaaaatattaa 327
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 717
Length adjustment: 9
Effective length of query: 312
Effective length of database: 708
Effective search space: 220896
Effective search space used: 220896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_n23.g1 MSMg01no193_n23.g1 CHROMAT_FILE:
MSMg01no193_n23.g1 PHD_FILE: MSMg01no193_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:33 2005
(297 letters)
>mm_chr14_93078671_93079367
Length = 697
Score = 543 bits (281), Expect = e-159
Identities = 290/293 (98%)
Strand = Plus / Plus
Query: 1 atctaaaagcagctgaagctattgggtctaagaacaaccttggataaagcgcaacctttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atctaaaagcagctgaagctattgggtctaagaacaaccttggataaagcacaacctttg 260
Query: 61 gcaggagaatgccagcagagactacacaaacaagggtttcactctaactttcaagatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggagaatgccagcagagactacacaaacaagggtttcactctaactttcaagatcgt 320
Query: 121 gacagttattggttgtttgtgttttcaactcattgttattgggggaaaaagttccaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacagttattggttgtttgtgttttcaactcattgttattgggggaaaaagttccaggaa 380
Query: 181 aagtttacccaggagaggcatatagttacttgtttcaaaggaagcaattgatggagtttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtttacccaggagaggcatatagttacttgtttcaaaggaagcaattgatggagtttc 440
Query: 241 agtcaacttcagttccagtattggctcactgtttgaatcagatccttatgtta 293
||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 441 agtcaacttcagttccagtattggctccctgtttgaaccagatccttatgtta 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
