CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCATGCATGCTAGTGCTCAGCTCTTTTTTTTTTTTTTTTTTTTTTTCT
GTTCCTGTTTAATCTGGGACACCGGGCTAGGGAAAGGTGCTACCCATAGT
GGATGGGACTTCCTGTCTCAATTAATGGAATCAATACTCCAACCCTGAAG
ATGAACAGGAGCACAATTCCCAGATGATTTTAAATTTTATCAAGTTGGCA
ATTGATACTAACCATTAGAAGGTTGTGTGAATGAATCTAAAGAAATAGTT
CCACTTGGATAAAAGTGTCTCCATTGTTTAAAGATACAGTGAATTCTAAA
CTCACGGGAGAATTAAACATGATGGAAAGCTAATGCATATGAAAGATTGA
TTTTTCTTTTATGTGATATGTATTATATTAAATTTTCCCTTAAAAGTTCT
TATTATTAAATTATGTATCTTTGAGATATATTGAATTCTTATAGGAAAAA
TAAATACAATTTAAAAAAAGAAAATGAATTGAGCTGTAGGCATACAATCT
ACCTTCAGTAGATTCAGTGTGGGCATCAAGTGGAAGGCTGGGGTTGCCAT
TCTATAGTCAAAAACTCTGACCCAGAATTTTCATGTCTGAAAGATCTCCA
GGGACAAAAGTGGAGAAGAGAGAGTGGAAAAGGAGGTCCAGTGGCCAACA
CTAGTTGAGATTCAGCTGAAAGAGGGGCCCCAAGTCCTGACTN

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTCTTGCGCGTACAAGGCTTGTT
TACTAGTTAGGCACAGCGGAGGCCCGCGCCATCTTATAATGGCAATTGCT
CGCAGCACGTACCGGCTTTCCACAATATGGATCTAAAGTCACTGCTCATG
ATGATGATGATGGAGGACTATAAGTTATAAAAATAACCCCCTTAAAGAAA
TACAGGAGAATACATACAAACAGGTGAAAGAATTGAACAAAACCATCCAG
GATCTAAAAATGGAAATAGAAATAATAAAGAAAACCCAAAGGAAGACAAC
TCTGGAAATAGAAAAGCTAAGAAAAATGTCAGGAGCCATAGATGCAAGCA
TAACAAACAAATTTCAAGAGATGAAAAGAGAATCTCAGGTGCAGAAGATA
ACATAGAAAATATTGACATAACAATCAAAGAAAATGCAAAATGCAAAAAG
ATCCTAACTCAAAACATACAGGAAATCCAGGACAAAATGAGAAAACCAAA
CCTACGGATAATAGGAGTAGATGAGAATGAAGATTTTCAACTTAAAGGGC
CAGCAAATACCTTCAACAAAATTATAGAAGAAAACTTCCCAAACCTAAAG
AAAGGCATGCCCATGAACATACAAGAAGCCTACAGAACTCCAAACAGACT
GTACCAGAAAAGAAATTCCTCCGTCACATAATAATCAAAATAC

Query= MSMg01no193_n24.b1 MSMg01no193_n24.b1 CHROMAT_FILE:
MSMg01no193_n24.b1 PHD_FILE: MSMg01no193_n24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:33 2005
         (622 letters)



>mm_chr14_90751031_90752052
          Length = 1022

 Score = 1187 bits (614), Expect = 0.0
 Identities = 617/618 (99%), Gaps = 1/618 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatgcatgctagtgctcagctctttttttttttttttttttttttctgttcctgt 64
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 916 gaattcatgcatgctagtgctcagctc-ttttttttttttttttttttttctgttcctgt 858

                                                                       
Query: 65  ttaatctgggacaccgggctagggaaaggtgctacccatagtggatgggacttcctgtct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 ttaatctgggacaccgggctagggaaaggtgctacccatagtggatgggacttcctgtct 798

                                                                       
Query: 125 caattaatggaatcaatactccaaccctgaagatgaacaggagcacaattcccagatgat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 caattaatggaatcaatactccaaccctgaagatgaacaggagcacaattcccagatgat 738

                                                                       
Query: 185 tttaaattttatcaagttggcaattgatactaaccattagaaggttgtgtgaatgaatct 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tttaaattttatcaagttggcaattgatactaaccattagaaggttgtgtgaatgaatct 678

                                                                       
Query: 245 aaagaaatagttccacttggataaaagtgtctccattgtttaaagatacagtgaattcta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aaagaaatagttccacttggataaaagtgtctccattgtttaaagatacagtgaattcta 618

                                                                       
Query: 305 aactcacgggagaattaaacatgatggaaagctaatgcatatgaaagattgatttttctt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aactcacgggagaattaaacatgatggaaagctaatgcatatgaaagattgatttttctt 558

                                                                       
Query: 365 ttatgtgatatgtattatattaaattttcccttaaaagttcttattattaaattatgtat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttatgtgatatgtattatattaaattttcccttaaaagttcttattattaaattatgtat 498

                                                                       
Query: 425 ctttgagatatattgaattcttataggaaaaataaatacaatttaaaaaaagaaaatgaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ctttgagatatattgaattcttataggaaaaataaatacaatttaaaaaaagaaaatgaa 438

                                                                       
Query: 485 ttgagctgtaggcatacaatctaccttcagtagattcagtgtgggcatcaagtggaaggc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttgagctgtaggcatacaatctaccttcagtagattcagtgtgggcatcaagtggaaggc 378

                                                                       
Query: 545 tggggttgccattctatagtcaaaaactctgacccagaattttcatgtctgaaagatctc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggggttgccattctatagtcaaaaactctgacccagaattttcatgtctgaaagatctc 318

                             
Query: 605 cagggacaaaagtggaga 622
           ||||||||||||||||||
Sbjct: 317 cagggacaaaagtggaga 300


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space:   619344
Effective search space used:   619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)