Query= MSMg01no194_c20.b1 MSMg01no194_c20.b1 CHROMAT_FILE:
MSMg01no194_c20.b1 PHD_FILE: MSMg01no194_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:59 2005
(651 letters)
>mm_chr14_110497110_110498160
Length = 1051
Score = 1062 bits (549), Expect = 0.0
Identities = 634/685 (92%), Gaps = 40/685 (5%)
Strand = Plus / Minus
Query: 5 gaattcacccattacttcccatgaaaaaaacagtgggtcatctccagaaaacttatatac 64
||||||||||||||| | ||||| ||||| |||||||||||||||||||| |||||||
Sbjct: 905 gaattcacccattacatgccatg--aaaaatagtgggtcatctccagaaaaattatataa 848
Query: 65 cttagccttttctgtatggcttcggacaaataagacaaatattgttaactaaatatgcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 cttagccttttctgtatggcttcggacaaataagacaaatattgttaactaaatatgcat 788
Query: 125 caaattacacattctcag-ttcagtgtcatctgaaaaatggcatactttgacaaggaatt 183
|||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 787 caaattgcacattctcagtttcagtgtcatctgaaaaatggcatgctttgacaaggaatt 728
Query: 184 tgttattttataaccagctcactactacatgttgtcaattcactgtcctgacaccattgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tgttattttataaccagctcactactacatgttgtcaattcactgtcctgacaccattgc 668
Query: 244 agatctccaggatctctacatctcag--------------------g-actcttatttgt 282
|||||||||||||||||||||||||| | ||||||||||||
Sbjct: 667 agatctccaggatctctacatctcagcactcttatttgtaaaacaagcactcttatttgt 608
Query: 283 aaaacaaggtctattaatactaagctgttgagttactgggtgggtttaacacattaatat 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aaaacaaggtctattaatactaagctgttgagttactgggtgggtttaacacattaatat 548
Query: 343 attgaaatattaatggacatatttagtatagtatttctcaagatacattagtgtatgctg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 547 attgaaatattaatggacatatttagtatagtatttctcaagatacattagtgtatgttg 488
Query: 403 ttaatactattgtaccattatcaaactgtcttttacatatgtatatttataaatatagag 462
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 487 ttaataatattgtaccattatcaaactgtcttttacatacgtatatttataaatatagag 428
Query: 463 gtatgttgctgacagccttggcaagaaattttctttttattttatttt------------ 510
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtatgttgctgacagccttggcaagaaattttctttttattttattttattttattttat 368
Query: 511 ---tatttttttattacgtattttcctcaattacatttccaatgctatcccaaaagtccc 567
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ttttatttttttattacgtattttcctcaattacatttccaatgctatcccaaaagtccc 308
Query: 568 ccacaccctccccccc-acactcccctacccacccattcccattttttggccctggcatt 626
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ccacaccctccccccccacactcccctacccacccattcccattttttggccctggcatt 248
Query: 627 cccctgtactggggcatataaagtt 651
|||||||||||||||||| ||||||
Sbjct: 247 cccctgtactggggcataaaaagtt 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_c20.g1 MSMg01no194_c20.g1 CHROMAT_FILE:
MSMg01no194_c20.g1 PHD_FILE: MSMg01no194_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:59 2005
(670 letters)
>mm_chr14_110425052_110426121
Length = 1070
Score = 1228 bits (635), Expect = 0.0
Identities = 660/671 (98%), Gaps = 7/671 (1%)
Strand = Plus / Plus
Query: 1 cactaactacagtggaagaactaataagtgaaaagctaagcccagtgagagtctgtagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactaactacagtggaagaactaataagtgaaaagctaagcccagtgagagtctgtagta 260
Query: 61 acagaatgtgtattacacacacttttagctgtctctatattttatacttttcctccaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagaatgtgtattacacacacttttagctgtctctatattttatacttttcctccaata 320
Query: 121 gcatagaatttgggcttcatttcccttacttaggtataatattataacattttgatatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcatagaatttgggcttcatttcccttacttaggtataatattataacattttgatatgc 380
Query: 181 aaaaataaaaattgtctgaagcaatatgaagcatgatgatttcggtcacaaatatcaaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 aaaaataaaaattgtctgaagcaatatgaagcatgatgatttcagtcacaaatatcaaaa 440
Query: 241 tttctggtttatagtttcatgaagtttgttttgttttgttttgttctgtttttttgaaaa 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 tttctggtttatagtttcatgaagtttgttttgttttgttttgtt-----tttttgaaaa 495
Query: 301 tagatttttctctttaacaatacatcctgaccatgaaaatgaatgtacacgaggtaagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tagatttttctctttaacaatacatcctgaccatgaaaatgaatgtacacgaggtaagta 555
Query: 361 caatttatttgcatttggagtatcttaaatctgtttagatacatttcatattactttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caatttatttgcatttggagtatcttaaatctgtttagatacatttcatattactttgaa 615
Query: 421 gaggaagtttcagatagtcagccttaaatatgcaacttttttt-aattgtataaaaacac 479
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 616 gaggaagtttcagatagtcagccttaaatatgcaacttttttttaattgtataaaaacac 675
Query: 480 atcttccttgattgaccaaccacagtttcctatcgatccactgccacctcttaacctcat 539
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 676 atcttccttgattgaccaaccacagtttcctatcgatccactgccacctcctaacctcat 735
Query: 540 ctctcctctcagatccactttcccttctttttcttacagaaaataaaaggccccaagaaa 599
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 736 ctctcctctcagatccactttcctttctttttcctacagaaaataaaaggccccaagaaa 795
Query: 600 gaaatagcaataattaagaaaaaaaaaaagacacactaaggcaagaccaaggtcctcatg 659
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 796 gaaatagcaataattaagaaaaaaaaaa-gacacactaaggcaagaccaaggtcctcatg 854
Query: 660 ttgagtcttga 670
|||||||||||
Sbjct: 855 ttgagtcttga 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
