Query= MSMg01no194_p24.b1 MSMg01no194_p24.b1 CHROMAT_FILE:
MSMg01no194_p24.b1 PHD_FILE: MSMg01no194_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:04 2005
(371 letters)
>mm_chr14_105367801_105368575
Length = 775
Score = 669 bits (346), Expect = 0.0
Identities = 364/372 (97%), Gaps = 4/372 (1%)
Strand = Plus / Minus
Query: 4 ggaattcccatattgcttaggctagtgttgaactatctatgtagctcagactagtctcag 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 661 ggaattcccatattgcttaggctagtgttgaactatctatgtagctcagactagcctcag 602
Query: 64 actcacaatcctcctgcctcagcctcactatggctttaaaatctctttgtaaacaatgtc 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 actcacaatcctcctgcctcagccttactatggctttaaaatctctttgtaaacaatgtc 542
Query: 124 aaaattcaagaaacggattgttttctacaaacaaaaagtggtggttttatgaaaatgcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaaattcaagaaacggattgttttctacaaacaaaaagtggtggttttatgaaaatgcaa 482
Query: 184 tctttttaacagtgtatttaggcaacaaactgaaaagacatgtcgatagaaacgatatct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctttttaacagtgtatttaggcaacaaactgaaaagacatgtcgatagaaacgatatct 422
Query: 244 attgggagtatcctgtttgtcctggacaagtttggcttggtaagggaacataaacacttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 attgggagtatcctgtttgtcctggacaagtttggcttggtaagggaacataaacacttc 362
Query: 304 cttttttgtgtttttttt----gggggggctaagattaggtcatgttcttgtcctctcca 359
|||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||
Sbjct: 361 cttttttgtgttttttttgggggggggggctaagatgagggcatgttcttgtcctctcca 302
Query: 360 agtttgaagctg 371
||||||||||||
Sbjct: 301 agtttgaagctg 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 775
Length adjustment: 9
Effective length of query: 362
Effective length of database: 766
Effective search space: 277292
Effective search space used: 277292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_p24.g1 MSMg01no194_p24.g1 CHROMAT_FILE:
MSMg01no194_p24.g1 PHD_FILE: MSMg01no194_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:14:04 2005
(558 letters)
>mm_chr14_105333271_105334229
Length = 959
Score = 1011 bits (523), Expect = 0.0
Identities = 549/559 (98%), Gaps = 4/559 (0%)
Strand = Plus / Plus
Query: 1 tctgtaataaaaaagaaagcggctcatgtaatttccccatttttattttcctacatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgtaataaaaaagaaagcggctcatgtaatttccccatttttattttcctacatggaa 260
Query: 61 tagggtcgctctaacataatgtacgactttgtgaatatttgcagagctgctaatatttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagggtcgctctaacataatgtacgactttgtgaatatttgcagagctgctaatatttta 320
Query: 121 tctaatattatattttgtgttttttgatctctgacccctgtttatactcccagaaccctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaatattatattttgtgttttttgatctctgacccctgtttatactcccagaaccctc 380
Query: 181 atgagcaatgctcactatgataacctttagtggaagaagctgggctaaaatggaagttaa 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 atgagcaatgctcactatgataacctttagtggaagaagccgggctaaaatggaagttaa 440
Query: 241 attatccatggctcaaatctctcaaggaggcctcttagggtcagtagtg-ttttttttcc 299
|| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 atcatccatggctcgaatctctcaaggaggcctcttagggtcagtagtgattttttttcc 500
Query: 300 atgtatatttctctactttaagaatgtttcttaaatatttgattcaccacgactgaaata 359
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 501 atgtatatttctctactttaagaatgtttcttaaatatttgattcatcaggactgaaata 560
Query: 360 taagccttcttttcgaatagatcactgtcaaacactgtagagtgtgaccatgacccgagt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagccttcttttcgaatagatcactgtcaaacactgtagagtgtgaccatgacccgagt 620
Query: 420 tcttcctgtccttttattattattattattatttcacattgttcattatttcaatatata 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 tcttcctgtccttttattattattattatt---tcacattgttcattatttcaatatata 677
Query: 480 ttcctacatcctctggggaccaacaaaccgaaacaagaagagcccaggaaaaaatggtga 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 678 ttcctacatcctctggggaccaacaaaccgaaacaagaagagcccaggaaaaaatgatga 737
Query: 540 gacaatacatagcttttaa 558
|||||||||||||||||||
Sbjct: 738 gacaatacatagcttttaa 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 959
Length adjustment: 10
Effective length of query: 548
Effective length of database: 949
Effective search space: 520052
Effective search space used: 520052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
