Query= MSMg01no195_p21.b1 MSMg01no195_p21.b1 CHROMAT_FILE:
MSMg01no195_p21.b1 PHD_FILE: MSMg01no195_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:23 2005
(686 letters)
>mm_chr14_93544001_93545088
Length = 1088
Score = 1268 bits (656), Expect = 0.0
Identities = 677/684 (98%), Gaps = 2/684 (0%)
Strand = Plus / Minus
Query: 5 gaattctgacagc-aaatcattctgagataaggaagggaatagtctgaggatttctgtat 63
||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 888 gaattctgacagcaaaataattctgagataaggaaggaaatagtctgaggatttctgtat 829
Query: 64 tattttaaaaactctaactactcagtgattcctttatctaaatggtctttttcctttctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 tattttaaaaactctaactactcagtgattcctttatctaaatggtctttttcctttctt 769
Query: 124 cttgagttttgaaagactgattggaaattttaggcttcttctcactgtctttaataattc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 cttgagttttgaaagactgattggaaattttaggcttcttctcactgtctttaataattc 709
Query: 184 ctataaaatctga-tttttttactacatatgatgcatataatattctacaaattatcagg 242
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 708 ctataaaatctgattttttttactacatacgatgcatataatattctacaaattatcagg 649
Query: 243 ttctgtttatttattagtgctatctcaattttaagaagtgaaatcttgacacagaaacag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ttctgtttatttattagtgctatctcaattttaagaagtgaaatcttgacacagaaacag 589
Query: 303 attaaataaatgtatcaaaatgcaaaaacgccaaggtaatttaatgacactgtgacaatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 attaaataaatgtatcaaaatgcaaaaacgccaaggtaatttaatgacactgtgacaatg 529
Query: 363 attaaaataatagagttgtagccatatgtatcgtagagtagggtgagaggcattatttga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 attaaaataatagagttgtagccatatgtatcgtagagtagggtgagaggcattatttga 469
Query: 423 aagcatcacattatacttgcgacctccagcctcacagatgatgtccctgaatcctagagc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 468 aagcatcacattatacttgcgacctccagcctcacagatgatgtccctgaatcctcgagc 409
Query: 483 tggctttctgcaactggacttgaagttgaactttaagttgtcaggggcactgagaacttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tggctttctgcaactggacttgaagttgaactttaagttgtcaggggcactgagaacttt 349
Query: 543 tggggtccaggaaaactgcataatccaggaaatccaaaggttctgtatagctaggcttca 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tggggtccaggaaaactgcataatccaggaaatccaaaggttctgtatagctaggcttca 289
Query: 603 ttcaaatgggcatttttgataattactattacgtaatttaatattatcttacaacaaata 662
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 288 ttcaaatgggcatttttgataattactattacgtaatttaatattatcttagaacaaata 229
Query: 663 acccaaaatacatgttttcataaa 686
||||||||||||||||||||||||
Sbjct: 228 acccaaaatacatgttttcataaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1088
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1078
Effective search space: 728728
Effective search space used: 728728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_p21.g1 MSMg01no195_p21.g1 CHROMAT_FILE:
MSMg01no195_p21.g1 PHD_FILE: MSMg01no195_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:23 2005
(681 letters)
>mm_chr14_93438780_93439860
Length = 1081
Score = 1278 bits (661), Expect = 0.0
Identities = 676/681 (99%)
Strand = Plus / Plus
Query: 1 acagttgcaaagcccttaacaagctacatggcatgaatggagatgggccaagccacccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagttgcaaagcccttaacaagctacatggcatgaatggagatgggccaagccacccca 260
Query: 61 tttttcctggttatcccagtgacagatgtaaaatcacctatgatcattttggctgagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttcctggttatcccagtgacagatgtaaaatcacctatgatcattttggctgagatg 320
Query: 121 atcagtagcaattgtggaaatgaccaaagctcagtttgtcacgtatttactgcctaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcagtagcaattgtggaaatgaccaaagctcagtttgtcacgtatttactgcctaagta 380
Query: 181 tgtcaacgcgttcatcaaacatctgacatggggaagttcaggttgagtggcagcacttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcaacgcgttcatcaaacatctgacatggggaagttcaggttgagtggcagcacttaa 440
Query: 241 ggaaacattagggacaggagcacagggtggatttgaggtaagccagcactctatccttgt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggaaacattagggacaggagcgcagggtggatttgaggtaagccagcactctatccttgt 500
Query: 301 taacgatttaccaccttgtgccgacacgtctttcctcaagccatctgctcccttcatatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taacgatttaccaccttgtgccgacacgtctttcctcaagccatctgctcccttcatatc 560
Query: 361 attagagaacaaggcacagaccacatttgttccctgtgtttacttagctgcatatttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attagagaacaaggcacagaccacatttgttccctgtgtttacttagctgcatatttatt 620
Query: 421 ggtgagtgcatgataggattttcattaattcaaaaacctgtgtgttctgatacaaaaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggtgagtgcatgataggattttcattaattcaaaaacctgtgtgttctgatacaaaaatt 680
Query: 481 agctacttggacatggaaattgtattctaggaaaaaaatatgtcttgttctgaagtagat 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctacttggacatggaaattatattctaggaaaaaaatatgtcttgttctgaagtagat 740
Query: 541 tcaattactttaaagaaaagatgattaattttattgatgcatgcctatccttttactcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaattactttaaagaaaagatgattaattttattgatgcatgcctatccttttactcca 800
Query: 601 aactttcctatcaaaaccagaaatatgtaaaagccctatgtatattgtatttagattgat 660
|||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 801 aactttcctaacaaaatcagaaatatgtaaaagccctatgtatattgtatctagattgat 860
Query: 661 tataataatctctttattaat 681
|||||||||||||||||||||
Sbjct: 861 tataataatctctttattaat 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space: 718641
Effective search space used: 718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
