Query= MSMg01no195_p22.b1 MSMg01no195_p22.b1 CHROMAT_FILE:
MSMg01no195_p22.b1 PHD_FILE: MSMg01no195_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:23 2005
(683 letters)
>mm_chr14_24186131_24187214
Length = 1084
Score = 1270 bits (657), Expect = 0.0
Identities = 675/681 (99%), Gaps = 1/681 (0%)
Strand = Plus / Plus
Query: 4 gaattcttggtgctt-tctcaaaatagggcaacgttctaaattttgcccaggaaagagag 62
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcttggtgcatatatcaaaatagggcaacgttctaaattttgcccaggaaagagag 263
Query: 63 tttagacaatggtaagctagtgcgtgtgaaggtagctcaacttcacccgacaagaggctg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttagacaatggtaagctagtgcgtgtgaaggtagctcaacttcacccgacaagaggctg 323
Query: 123 cacttggctgcaaattcttttaataaggcctcccagggttttactttcttagcagagcac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cacttggctgcaaattcttttaataaggcctcccagggttttactttcttagcagagcac 383
Query: 183 aggggaaggacagctatgtcctcaggcctgtagcaacaaaaaggagcagagacatgatca 242
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 aggggaaggacagctatgtcctcaggcctgtagcaacaaaaaggagcagagacacgatca 443
Query: 243 aagcctcaacaattacagccacctgggacttcttcttttgaatgtaaagatgaagaactg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aagcctcaacaattacagccacctgggacttcttcttttgaatgtaaagatgaagaactg 503
Query: 303 gacattaaatagtgcgacttgacttacaggcaatatggacactttcgggaagttgtgcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gacattaaatagtgcgacttgacttacaggcaatatggacactttcgggaagttgtgcag 563
Query: 363 tgtttcccactccctcttgaggtactcaatggagcccacaaacacaatgtgtttgagctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtttcccactccctcttgaggtactcaatggagcccacaaacacaatgtgtttgagctc 623
Query: 423 atgatagtgaaagttgctagcacgaagtggcatcaccaggttccggaggccaatcagggc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgatagtgaaagttgctagcacgaagtggcatcaccaggttccggaggccaatcagggc 683
Query: 483 tgagctgacatccccaaagatgcagactacgacatggccactcaggacagtcatggcagc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgagctgacatccccaaagatgcagactacgacatggccactcaggacagtcatggcagc 743
Query: 543 ttcacttcgagtctgaaacagagagggttgcaagagttttagaaagaagtactcacaaca 602
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 744 ttcacttcgagtctgaaacagagagggttgcaagagttttagaaagaagtgctcacaaca 803
Query: 603 ctggtataaggggagaaagcatcacttatgcagagaagaaagcgaacactcattgaccac 662
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 804 ctggtataaggggagaaagcatcacttacgcagagaagaaagcgaacactcattgaccac 863
Query: 663 ctactgtggaccactgctgtg 683
|||||||||||||||||||||
Sbjct: 864 ctactgtggaccactgctgtg 884
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no195_p22.g1 MSMg01no195_p22.g1 CHROMAT_FILE:
MSMg01no195_p22.g1 PHD_FILE: MSMg01no195_p22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:23 2005
(286 letters)
>mm_chr14_24336692_24337377
Length = 686
Score = 503 bits (260), Expect = e-147
Identities = 278/284 (97%)
Strand = Plus / Minus
Query: 1 cactagttatccagcataaccaaacctgtgagctccaggctgagtgagagatctcatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 cactagttatccagcataaccaaacctgtgagctccaggctgagtgagagatctcatttc 494
Query: 61 agaaaataatgtagagagtaattgaggaagatgcctgatgccagcctctggcttccatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agaaaataatgtagagagtaattgaggaagatgcctgatgccagcctctggcttccatgt 434
Query: 121 gcacatgtgcccacctgtgcatgtccagaaacaaattcccctctctgaaaggaaataaag 180
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 433 gcacatgtgaccacctgtgcatgtccagatacaaattcccctctctgaaaggaaataaag 374
Query: 181 gagaaaagagttagcaaggtggcagtgatgtgataatacctgaacactggaatgggtggg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 373 gagaaaagagttagcaaggtggcagtgatgtgataaaacctgaacactggaatgggtggg 314
Query: 241 ttggggagcaggatttggggaggatatagggggctttggggata 284
||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 313 ttggggagcaggacagggggaggatatagggggctttggggata 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
