Query= MSMg01no198_d08.b1 MSMg01no198_d08.b1 CHROMAT_FILE:
MSMg01no198_d08.b1 PHD_FILE: MSMg01no198_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:22 2005
(319 letters)
>mm_chr14_82882963_82883687
Length = 725
Score = 571 bits (295), Expect = e-167
Identities = 313/321 (97%), Gaps = 6/321 (1%)
Strand = Plus / Minus
Query: 5 gaattctgaggaaaacgtt-aaaaaattttaagctttttaattg-aaaaaaaaaggaaga 62
||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 525 gaattctaaggaaaacgttaaaaaaattttaagctttttaattgaaaaaaaaaaggaaga 466
Query: 63 aataaacag----aaaataaaacaaaactttaactttgccactaggagcataagaaatgc 118
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aataaacagaaaaaaaataaaacaaaactttaactttgccactaggagcataagaaatgc 406
Query: 119 catttttcatctggctgcagtctgcttctcatggctctccacagaactactccaattctc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 catttttcatctggctgcagtctgcttctcatggctctccacagaactactccaattctc 346
Query: 179 tttgtcatggaactgagaaaattgaagctatttatcagtcccaaataggagcaaggacta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttgtcatggaactgagaaaattgaagctatttatcagtcccaaataggagcaaggacta 286
Query: 239 gagacttccgatgactttgttttgactttgttttctgtggtaactcaacataagtaaaac 298
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 285 gagacttccgatgactttgttttgactttgttttctgtggtaactcaacataggtaaaac 226
Query: 299 agacttggcctggtaaaggat 319
|||||||||||||||||||||
Sbjct: 225 agacttggcctggtaaaggat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 725
Length adjustment: 9
Effective length of query: 310
Effective length of database: 716
Effective search space: 221960
Effective search space used: 221960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_d08.g1 MSMg01no198_d08.g1 CHROMAT_FILE:
MSMg01no198_d08.g1 PHD_FILE: MSMg01no198_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:22 2005
(292 letters)
>mm_chr14_82793489_82794181
Length = 693
Score = 551 bits (285), Expect = e-161
Identities = 291/293 (99%), Gaps = 1/293 (0%)
Strand = Plus / Plus
Query: 1 aacataattaaacaagtttaatttgtatgacaaaacaatttttttt-cttccaagaatct 59
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aacataattaaacaagtttaatttgtatgacaaaacaatttttttttcttccaagaatct 260
Query: 60 aaataattgtttctccatcatggaagtttgatagttgaacttctatgatcatctattggt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataattgtttctccatcatggaagtttgatagttgaacttctatgatcatctattggt 320
Query: 120 aattaccatctgttgacaaatgaaaatcttgaaaatatgttaatgctaattatttgaaac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaccatctgttgacaaatgaaaatcttgaaaatatgttaatgctaattatttgaaac 380
Query: 180 actgcaaaatgttatgtgaagattaaagaaacaaatggaattacaatgagaaagggaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgcaaaatgttatgtgaagattaaagaaacaaatggaattacaatgagaaagggaagt 440
Query: 240 ctttgaaacttgttatggttaccttaagtaattgaagagctgatagagtaaca 292
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttggaaacttgttatggttaccttaagtaattgaagagctgatagagtaaca 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
