Query= MSMg01no201_m20.b1 MSMg01no201_m20.b1 CHROMAT_FILE:
MSMg01no201_m20.b1 PHD_FILE: MSMg01no201_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:18 2005
(268 letters)
>mm_chr14_103987221_103987887
Length = 667
Score = 482 bits (249), Expect = e-140
Identities = 260/264 (98%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 2 agaatccagnaccattgcttagatcctagcatggtggtggtttcacacagctgttgctcc 61
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 202 agaatccagtaccattgcttagatcctagcatggtggtggtttcacacag-tgttgcccc 260
Query: 62 tttaaaagtggtggtagcacatagcatgtcgttttgtctggtgggcttttgtttctcaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaaagtggtggtagcacatagcatgtcgttttgtctggtgggcttttgtttctcaaa 320
Query: 122 ctttgggtatgctctttattaaagggttaataactaatttatcgaatagcaaatagcaca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgggtatgctctttattaaagggttaataactaatttatcgaatagcaaatagcaca 380
Query: 182 aaaatgaaccaaatattctagttctaatgttgtaagggcactgtttcttgcaatctctct 241
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatgaaccaaatattcaagttctaatgttgtaagggcactgtttcttgcaatctctct 440
Query: 242 ctctctctctctctctctctctct 265
||||||||||||||||||||||||
Sbjct: 441 ctctctctctctctctctctctct 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 667
Length adjustment: 9
Effective length of query: 259
Effective length of database: 658
Effective search space: 170422
Effective search space used: 170422
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no201_m20.g1 MSMg01no201_m20.g1 CHROMAT_FILE:
MSMg01no201_m20.g1 PHD_FILE: MSMg01no201_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:22:18 2005
(596 letters)
>mm_chr14_104030653_104031646
Length = 994
Score = 934 bits (483), Expect = 0.0
Identities = 508/519 (97%), Gaps = 7/519 (1%)
Strand = Plus / Minus
Query: 82 tttgccttaaataatttggctgctccccatacattttggaattttctgtttttatcattg 141
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 tttgccttaaataatttggttgctccccatacattttggaattttctgtttttatcattg 935
Query: 142 ttggctttaaatgcattataactgtgtcttgactcatgaaattactttggcaatttcaga 201
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 934 ttggctttaaatgcattataactgtgtcttgactcatgaaattacttcggcaatttcaga 875
Query: 202 atataattctcatttatatatac----atatatatatggctgtatattttttattagtca 257
||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||
Sbjct: 874 atataattctcatttatatatacatatatatatatatagctgtata-tttttattagtca 816
Query: 258 atattaataattatttaatttgtattgtaataagtaaccatagtctatgtaaatctgatt 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 atattaataattatttaatttgtattgtaataagtaaccatagtctatgtaaatctgatt 756
Query: 318 tagtggaatttgataggatttattaaatggtctagcacatgatcaataacacatatctac 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tagtggaatttgataggatttattaaatggtctagcacatgatcaataacacatatctac 696
Query: 378 ttagatattatatatatatatactatattaagtacattgtactgtacacataaacagttt 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttagatattatatatatatatactatattaagtacattgtactgtacacataaacagttt 636
Query: 438 acaatcatatatcatttatctaagcttttagtgtttacacatatatatgcaacttatata 497
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 635 ataatcatatatcatttatctaagcttttagtgtttacacatatatatgcaact--tata 578
Query: 498 tatatttgtttgaaattaaatgctacacatgctacttaaactatcttaacaattactaaa 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 tatatttgtttgaaattaaatgctacacatgctacttaaactatcttaacaattactaaa 518
Query: 558 atctaaatattttattacaatagtatatgtgttttgttt 596
|||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atctaaatattttattacaatagtatatgtgttttgttt 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 994
Length adjustment: 10
Effective length of query: 586
Effective length of database: 984
Effective search space: 576624
Effective search space used: 576624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
