Query= MSMg01no202_m20.b1 MSMg01no202_m20.b1 CHROMAT_FILE:
MSMg01no202_m20.b1 PHD_FILE: MSMg01no202_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:45 2005
(285 letters)
>mm_chr14_48169139_48169823
Length = 685
Score = 497 bits (257), Expect = e-145
Identities = 278/289 (96%), Gaps = 8/289 (2%)
Strand = Plus / Plus
Query: 1 agcatccttagagctaaggttataggtatgtgccatcatacccagctaccctggaacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 agcatccttagagctaaggttataggtatgtgccatcatacccagctacagtggaacaga 260
Query: 61 aatcaggtcatttaccctgcagtactagttagtaactcatctgcagacccaaccctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcaggtcatttaccctgcagtactagttagtaactcatctgcagacccaaccctgcag 320
Query: 121 ccacaagagcactgtcaagatcctcttttgtggcgtaggatgctcgctcgggtgcctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacaagagcactgtcaagatcctcttttgtggcgtaggatgctcgctcgggtgcctgct 380
Query: 181 gatccatcaggacataatgttagcacaaggcttctgcactactagcctctctcagaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatccatcaggacataatgttagcacaaggcttctgcactactagcctctctcagaggcc 440
Query: 241 tga----ttttttgtctctatgccaactggtagtaatttaactttttcc 285
||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaccagtg----gtctctatgccaactggtagtaatttaactttttcc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no202_m20.g1 MSMg01no202_m20.g1 CHROMAT_FILE:
MSMg01no202_m20.g1 PHD_FILE: MSMg01no202_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:23:45 2005
(284 letters)
>mm_chr14_48280203_48280884
Length = 682
Score = 514 bits (266), Expect = e-150
Identities = 279/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Minus
Query: 1 aggaaaaaagtggagaagaaaggaacttagcccatgatgaggtaatcgccgaaagagggt 60
|||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 482 aggaaaaaagtggagaagaaaggaacttagcccatgatgaggtaatgg--gaaagagggt 425
Query: 61 tgagacaaagttaacttagctgtagttgacagaaatcccatctttaaatttgtctaagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tgagacaaagttaacttagctgtagttgacagaaatcccatctttaaatttgtctaagcc 365
Query: 121 cactgtatacaatgcagtatgtatgtcaaattggtaacagagagactagcagagggttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cactgtatacaatgcagtatgtatgtcaaattggtaacagagagactagcagagggttct 305
Query: 181 gtctcggccaaatttagcaaaagtgacctatgtccccttattaggcatggagtatcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtctcggccaaatttagcaaaagtgacctatgtccccttattaggcatggagtatcaata 245
Query: 241 tcttttcttcatgcatataattatatacaagttttaatggattc 284
||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 244 tcttttcaacatgcatataattatatacaagttttaatggattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 682
Length adjustment: 9
Effective length of query: 275
Effective length of database: 673
Effective search space: 185075
Effective search space used: 185075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
