TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCAGTTCTGAGCCCCATTTTTAATGGGGTTATTTGATTTT
CTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCT
ATCTGATTTAGGATAGGTAAAGAACCTTTCCCAATCTGTTGGTGGTCTTT
TTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAATTTTGGAGTTTCATT
AGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCT
GTTCAGGAATTTTTCCCCTGTGCTCATATCTTCAAGGCTTTTCCCCACTT
TCTCCTCTATATAGTTTCAGCGTCTCTGGTTTTATGTGAAGTTCCTTGAT
CCACTTACATTTGACCTTAGTACAAGGAGATAAGTATGGATCAATTTGCA
TTCTTCTACATGATAACAACCAATTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGGCTTTAATTCTATTCCATTGTT
CTATTTGTCTGTCTCTATACTAGCACCTTGGCTCTTTATTGCTCTCTTGT
TGTTTAGCTAGGGTTTTTCCCAGATCAGCTTGTGCCTTTCTTTGCATCCC
TTCTCCTCTGATATCGATTTGTATT

TCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATGAAATTCTTAGGCCAATGGATG
AAACTAGATGGATACTGCCCCATCTGGGGATCCATCTCATATACAGTCAA
CAAACCCGGACACTATTCTGGATGCCAAGAAGTGCTTGTGGACAGGAGCC
TGATATGCTGTCTCCTGAGAGTCTCTGCCAGAGCCTGACAAATACAGAAG
TGGATGCTCGAAGCCAACCATTGGACTAAGCACATGGTCCCAAATGGAGG
AGCTAGAGAAAGGATTGAGGGAGCTGAAGGGCTTTGAAACCCCATAGGAA
GAACAATATCAATCAACAAGACCCACGAGAGCTCCCAGGAACTAAACCAC
CAAACAAAGAATACACATGGAGGGACCCATGGCTCCAGCCACATATGTAG
CAGAGGATAGCCTTGTAGGGCATAAATGGGAGGAGAGACTCTTGGTACTG
TGAAGGCTAGATAACCCAGTGTAGGGTACATTCACAAATATTTCAACCTT
GAGTTTTAGTCTTTATTTGCAGAGTCTAGTCTCAGTCAGAATTTGACTAA
TTATGTTTAACTATAATATTTCTATCTTCAATACACATTTTTCAACTCTC
TGCTAAAAAATAAATCTACTGTTAACTGAAGTGACATTTTTTTTTTAACA
CGTGTTCTTGTAGACCACTAT

Query= MSMg01no204_a07.g1 MSMg01no204_a07.g1 CHROMAT_FILE:
MSMg01no204_a07.g1 PHD_FILE: MSMg01no204_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:25:24 2005
         (623 letters)



>mm_chr14_108394670_108395692
          Length = 1023

 Score = 1135 bits (587), Expect = 0.0
 Identities = 614/623 (98%), Gaps = 2/623 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaattcttaggccaatggatgaaactagatggatactgccccatctggggatccatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaaattcttaggccaatggatgaaactagatggatactgccccatctggggatccatc 260

                                                                       
Query: 61  tcatatacagtcaacaaacccggacactattctggatgccaagaagtgcttgtggacagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatatacagtcaacaaacccggacactattctggatgccaagaagtgcttgtggacagg 320

                                                                       
Query: 121 agcctgatatgctgtctcctgagagtctctgccagagcctgacaaatacagaagtggatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctgatatgctgtctcctgagagtctctgccagagcctgacaaatacagaagtggatg 380

                                                                       
Query: 181 ctcga-agccaaccattggactaagcacatggtcccaaatggaggagctagagaaaggat 239
           ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctc-acagccaaccattggactaagcacatggtcccaaatggaggagctagagaaaggat 439

                                                                       
Query: 240 tgagggagctgaagggctttgaaaccccataggaagaacaatatcaatcaacaagaccca 299
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 440 tgagggagctgaagggctttgaaaccccataggaagaacaatatcaaccaacaagtccca 499

                                                                       
Query: 300 cgagagctcccaggaactaaaccaccaaacaaagaatacacatggagggacccatggctc 359
           | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccagagctcccaggagctaaaccaccaaacaaagaatacacatggagggacccatggctc 559

                                                                       
Query: 360 cagccacatatgtagcagaggatagccttgtagggcataaatgggaggagagactcttgg 419
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagccacatatgtagcagaggatggccttgtagggcataaatgggaggagagactcttgg 619

                                                                       
Query: 420 tactgtgaaggctagataacccagtgtagggtacattcacaaatatttcaaccttgagtt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tactgtgaaggctagataacccagtgtagggtacattcacaaatatttcaaccttgagtt 679

                                                                       
Query: 480 ttagtctttatttgcagagtctagtctcagtcagaatttgactaattatgtttaactata 539
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttagtcttcatttgcagagtctagtctcagtcagaatttgactaattatgtttaactata 739

                                                                       
Query: 540 atatttctatcttcaatacacatttttcaactctctgctaaaaaataaatctactgttaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atatttctatcttcaatacacatttttcaactctctgctaaaaaataaatctactgttaa 799

                                  
Query: 600 ctgaagtgacattttttttttaa 622
           |||||||||| ||||||||||||
Sbjct: 800 ctgaagtgactttttttttttaa 822


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)