Query= MSMg01no206_d07.b1 MSMg01no206_d07.b1 CHROMAT_FILE:
MSMg01no206_d07.b1 PHD_FILE: MSMg01no206_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:18 2005
(681 letters)
>mm_chr14_34533929_34535008
Length = 1080
Score = 1239 bits (641), Expect = 0.0
Identities = 671/681 (98%), Gaps = 1/681 (0%)
Strand = Plus / Plus
Query: 1 gaccagagtgtctaaacagtgaaaaaaggggggtgcctgagagaagatgtcttcaatcca 60
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 201 gaccagagtgtctaaacagtgaaaaaa-ggaggtgcctgagagaagatgtcttcaatcca 259
Query: 61 atcagacagggcagctgggcgctacagacctttcccgagagttagtaacattggtttgtt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atcagacagggcagctgggggctacagacctttcccgagagttagtaacattggtttgtt 319
Query: 121 tttattgttccacatgaaagaaaaatcagggatctttttctccttctccatggtaccatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttattgttccacatgaaagaaaaatcagggatctttttctccttctccatggtaccatc 379
Query: 181 ccataagcttggggaaatctgggggaggatgtatgcgtgacatttgcatcagttttgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccataagcttggggaaatctgggggaggatgtatgcgtgacatttgcatcagttttgggg 439
Query: 241 aaggtgtttatttttctaagtcattcagttgtccatggtctcaacagacatgcctgggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaggtgtttatttttctaagtcattcagttgtccatggtctcaacagacatgcctgggct 499
Query: 301 cccggtcgtgttgcaaccaaatgccatggcttctcatcttggtgagtagaaaggtcaaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cccggtcgtgttgcaaccaaatgccatggcttctcatcttggtgagtagaaaggtcaaaa 559
Query: 361 caattggagactcaagggagcagagaagctttagtgcagtggctctcagccttcgtaatg 420
|||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 560 caattggagactcaagggggcagagaagctttagtgcagtggctcttagccttcctaatg 619
Query: 421 ctgtgactccttaatattgtggtgccccccaatcataaacttatttctttgttacttctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctgtgactccttaatattgtggtgccccccaatcataaacttatttctttgttacttctt 679
Query: 481 aacagtaattgtaatggaaatatctcatatgcagcatatctgatatgccacccctgtaaa 540
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 680 aacagtaattgtaatggaaatatctcatatgcagcatatgtgatatgccacccctgtaaa 739
Query: 541 agagtcataggaccccatagaagttgctgcccacaggtcaggaaataacgctttaggacc 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 740 agagtcataggaccccatagaggttgctgcccacaggtcaggaaataacgctttaggacc 799
Query: 601 tgatgaagatgaggagaacatgggagttatctgcaaggcagagttcttctccaacaaaga 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgacgaagatgaggagaacatgggagttatctgcaaggcagagttcttctccaacaaaga 859
Query: 661 gagggggtattttattcaggg 681
|||||||| ||||||||||||
Sbjct: 860 gagggggtgttttattcaggg 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1080
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1070
Effective search space: 717970
Effective search space used: 717970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_d07.g1 MSMg01no206_d07.g1 CHROMAT_FILE:
MSMg01no206_d07.g1 PHD_FILE: MSMg01no206_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:18 2005
(360 letters)
>mm_chr14_34548296_34549055
Length = 760
Score = 594 bits (307), Expect = e-174
Identities = 322/329 (97%), Gaps = 4/329 (1%)
Strand = Plus / Minus
Query: 1 aggagtacatgctatggagagggtgaataaggagttaggactgggttccactccacttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggagtacatgctatggagagggtgaataaggagttaggactgggttccactccacttct 266
Query: 61 agtggagccatgaacattctcctacctctaccccaaagacacaggttttctaacgtgact 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 agtggagccatgaacattctcctacctctaccccaaaggcacaggttttctaacgtgact 206
Query: 121 tttggagcccagtgcactggcacacacttgtaatcccgcaggcacggagactgaggcagg 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 205 tttggagcccagtgcactggcacacacttgtaatcccacaggcacggagactgaggcagg 146
Query: 181 aagatatttgtgagttcaaggccagccgggaacgatctatctagaccactctcaaacaaa 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 145 aagatatttgtgagttcaaggccagccggggacgatctatctagaccactctcaaacaaa 86
Query: 241 aacaaaacaaacaaaccaagccacaacaacaaaaccaccaccctcccaacacatacagaa 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 aacaaaacaaac----caagccacaacaacaaaaccaccaccctcccaacacatacagaa 30
Query: 301 agaggggggaggagagagagagagagaga 329
|||||||||||||||||||||||||||||
Sbjct: 29 agaggggggaggagagagagagagagaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
