NGTTTTNNNNNGGACATTGGGCGCTAAGACTCCTATGGGAGAGGATCCGC
GGAATTCGCTCGTTCTCTGTCCGGGACGTTGGTTTTGTTTACGAGGATGG
CGCTGTGGTGGTTTACCTTGCAGTGCTAAGCAGATAAGAGCCTCACGCAC
GCGGTGCAGACACTTCACAGAACCAGATCCACAGTCCCCCCCGTGGAGAC
TGGCGACTTTCCTACTGAGTAACTGTGACCTTGCATGAATGCCCAACTAC
TGTTCTTGCCCTCAACAAGGCGTCCATTTCTAGTCACAGGCTCAGAGGCA
GGACAGCTACCAATCGACTTGGGGATAGCATAGAGTAAGGAGATGGGACT
GGATCCAGCTCTGGATGAAGCCGGATCTTGGGCACAGCTGGGCTGAGCGA
GAACTTCTTCCTGGTCTTAGCTGTAGGGAAAGAGCTCAGAATCCTAGAAA
AAAAAAGATCTGTTTAGCGCCCAGCAACAGCTTCACCTATAGCCCCTGAA
AGGGAGTTACTGGCTTACCTGAGGCAGACGCTGGTTTTCTGTAACTATAG
CAACAGCTAGCTCTCGCGAGAACTTGTTTTTTTCCCCACCTCAAAGAAGG
AGGTTGCAAATTTGGCTTGTGCTCTGAAAACCACGCCCCTTGGGTGTTTC
TCCTTTGCAAGTTTGAGTTAAAATGTAGCTTTCCACCTTTCAAGTCTTTT
TCCTTTACGATTGATTTCATTATCCACAAAAAATAGAATGATAAAATTAA
AAGGAACTTTAAGGAAAGAAACCTTAGATGTCTCCAAAAAAAAAAAAAAA
GTCTTTACTAAACAACTCCCATTTTAGCAGGGTGCCCTGGCCCTTGTCTC
TAGTTCTAGCTACTTGGGAGTCCGAAGGCAAAAAGGATTGCTTAAAGATT
GCTTGAATGGGTGTTTGAGGCTATACTGGGCAAATTTAAAATTCCCTGGC
CCTTGAAAAGTAAACTAACAAATTTAAATCTTTTCTCAAAAAACCTGGAC
CTTTAAAGGGGGCCTCTTGGAACATATAAAGGGTCTTTACTTTTAGGAAA
ACTTTGTTTTCTTTTTCTCGGGGGCCATACTTTTACTTCTCCTGTATAAA
AGGGGGGAAATTCCTCCCCTCCAGAGGGGGCCTGGGGCCGCCCTTCTTTT
GTGGAGTGGTCATGCCCTCTGCCCCGGCACCAAACAAACACTATCTCTTT
ATTATATAA

NNNAGTCTAGTGTAGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATCAAAATGTAATGTGTGTTAGAGAGCTA
GCTCAGTAAGTTAGTGCTTGGTTTTTGTTTGTTTGTTTGTTTGTTTTGTT
TTGTGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAGCTCACTCTG
TAGACCAGGCTAGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAA
GTACTGGGATTAAAGGCACGCGCCACCACACCCTGCAAGTTAGTGCTTGT
TAAACACCATGAAGACCCGAGTTCATTTGCCAGCATGCCTGGGAGGCATA
TTCATGGAGCTCACTGGGTAGCCAGCCAGAGCTGGATCAGTAAGTATGAG
CTAGTCTCCTACTGAGAGAACATGTTTTGAAAAGGAAAGCTGCTGTACCA
ATTTTTTTATCCCCCCGCGACCCACATCTACCAATGAGTACATATACCCA
TCTAAGCATGCCCACCTGCAAGGGTAAATACGGAAGCTGTTCTGCTTCTT
TCTCTCAGTTTCTCTAGTTTTTGTTTTCCATGGCTTGCCTGAATGTTTTA
ACATTGGAAAGAATTTTGTGGAAATGAGGAAGAATAGAAATAGAGTGCAT
GATGGTAAAAATGGTTCCATTCTTTAGAAGAATAAGTCCTAGGGCTTTCC
TTCTTATAGGGCTTTTCTTCTTATTTCCTTCTTATTTATTTCTTGAGAAA
TAAATTCCTCATGATTTGTGTTGTGAACTGTGATACAGCGGAAACATGTG
GGCCAAAATTATGAATTAGCAATTCAAGTTTTACTCACCCCTGCCTAGGT
GTCATAGTCTCATTTACCCAGTTGATTGATAGTTACTGAATGTTCCTGAA
AGTTTAGTGGAGTTTGCCAGAACCGTAATAAGAAGGTTTGCCACTTGCTT
TTCCCCATCTTGGTGAAAATTAAAAATTTTTGTTTGGTTATTAAAAACCC
TTGGTCTTGAAATTTCTGTGGTTCTCCTGGGTGTCTTTTTAAAGCCTCTT
TTTCCTTGACCCTTTCTTAACTTTTCTATAAGTCTCCCTAATAATAAAAT
ATTCTACATTTTATTCTTTTGAATAATCCCCTTTCTTTTTATTTTATTAT
CACCTTGTACCTCTTTTTTCCCCGGGGATA

Query= MSMg01no207_o02.b1 MSMg01no207_o02.b1 CHROMAT_FILE:
MSMg01no207_o02.b1 PHD_FILE: MSMg01no207_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:22 2005
         (357 letters)



>mm_chr14_21271179_21271933
          Length = 755

 Score =  634 bits (328), Expect = 0.0
 Identities = 350/358 (97%), Gaps = 4/358 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcaacagcttcacctatagcccctgaaagggagttactggcttacctgaggcagacgctg 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaacagcttcacctatagcccctaaaagggagttactggcttacctgaggcagacgctg 260

                                                                       
Query: 61  gttttctgtaactatagcaac-agctagctctcgcgagaacttgtttttttccccacctc 119
           ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gttttctgtaactatagcaaccagctagctctcgcgagaacttgtttttt-ccccacctc 319

                                                                       
Query: 120 aaagaaggaggttgcaaatttggcttgtgctctgaaaaccacgccccttgggtgtttctc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagaaggaggttgcaaatttggcttgtgctctgaaaaccacgccccttgggtgtttctc 379

                                                                       
Query: 180 ctttgcaagtttgagttaaaatgtagctttccacctttcaagtctttttcctttacgatt 239
           ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ctttgcaagtttgggttaaaatgtagctttccacctttcaaatctttttcctttacgatt 439

                                                                       
Query: 240 gatttcattatccacaaaaaatagaatgataaaattaaaaggaactttaaggaaagaaac 299
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatttcattatccacaaaaaatagaatgataaaattaaaaggaactttaaggaaagaaac 499

                                                                     
Query: 300 cttagatgtctccaaaaaaaaaaaaaaagtctttactaaacaactcccattttagcag 357
           ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 500 cttagatgtctccaaaaaaaaaaaaa--gtctttactaaacaactcccattttagcag 555


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 755
Length adjustment: 9
Effective length of query: 348
Effective length of database: 746
Effective search space:   259608
Effective search space used:   259608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no207_o02.g1 MSMg01no207_o02.g1 CHROMAT_FILE:
MSMg01no207_o02.g1 PHD_FILE: MSMg01no207_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:31:23 2005
         (382 letters)



>mm_chr14_21392078_21392860
          Length = 783

 Score =  629 bits (325), Expect = 0.0
 Identities = 349/367 (95%), Gaps = 17/367 (4%)
 Strand = Plus / Minus

                                                                       
Query: 32  ctcagtaagttagtgcttggtttttgtttgtttgtttg----------------tttgtt 75
           ||||||||||||||||||||||||||||||||||||||                ||||||
Sbjct: 783 ctcagtaagttagtgcttggtttttgtttgtttgtttgttttgttttgttttgttttgtt 724

                                                                       
Query: 76  ttgttttgtgacagggtttctctgtatagccctggctgtcctggagctcactctgtagac 135
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttgttttgtgacagggtttctctgtatagccctggctgtcctggagctcactctgtagac 664

                                                                       
Query: 136 caggctagctttgaactcagaaatccacctgcctctgcctcccaagtactgggattaaag 195
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 caggctagctttgaactcagaaatccacctgcctctgcctcccaagtactgggattaaag 604

                                                                       
Query: 196 gcacgcgccaccacaccctgcaagttagtgcttgttaaacaccatgaagacccgagttca 255
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gcacgcgccaccacaccctgcaagttagtgcttgttaaacaccatgaagacccgagttca 544

                                                                       
Query: 256 tttgccagcatgcctgggaggcata-ttcatggagctcactgggtagccagccagagctg 314
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 543 tttgccagcatgcctgggaggcatatttcatggagctcactgggtagccagccagagctg 484

                                                                       
Query: 315 gatcagtaagtatgagctagtctcctactgagagaacatgttttgaaaaggaaagctgct 374
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gatcagtaagtatgagcaagtctcctactgagagaacatgttttgaaaaggaaagctgct 424

                  
Query: 375 gtaccaa 381
           |||||||
Sbjct: 423 gtaccaa 417


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 783
Length adjustment: 9
Effective length of query: 373
Effective length of database: 774
Effective search space:   288702
Effective search space used:   288702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)