Query= MSMg01no209_g10.b1 MSMg01no209_g10.b1 CHROMAT_FILE:
MSMg01no209_g10.b1 PHD_FILE: MSMg01no209_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:31 2005
(297 letters)
>mm_chr14_76723369_76724066
Length = 698
Score = 516 bits (267), Expect = e-151
Identities = 288/295 (97%), Gaps = 1/295 (0%)
Strand = Plus / Plus
Query: 1 ggtctacactttcctcagacctgttcccactggtcacaacactgggaacaaggtgagaca 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 ggtctacactttcctcagacctgttcccactggtcataacactgggaacaaggtgagaca 260
Query: 61 ggagccctagcactcactgctgctgctggtcactaatgtgaggctaaagggagaattcac 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagtcctagcactcactgctgctgctggtcactaatgtgaggctaaagggagaattcac 320
Query: 121 tg-attcctggaattggctcactctctaaagcccttgtgttggggcgggagctgctggct 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcattcctggaattggctcactctctaaagcccttgtgttggggcgggagctgctggct 380
Query: 180 cgggctgctcctgtgatcccaggactctgctccatcgtgggaacctggagctagcttctt 239
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 381 cgggctgctcctgtgatcccaagactctgctcaatcgtgggaacctggagctagcttctt 440
Query: 240 ctggagtaaactggctattataacttagatgtgcttagatgggaaagagaatcca 294
||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggagtaaactggctaaaataacttagatgtgcttagatgggaaagagaatcca 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 698
Length adjustment: 9
Effective length of query: 288
Effective length of database: 689
Effective search space: 198432
Effective search space used: 198432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_g10.g1 MSMg01no209_g10.g1 CHROMAT_FILE:
MSMg01no209_g10.g1 PHD_FILE: MSMg01no209_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:31 2005
(285 letters)
>mm_chr14_76864103_76864787
Length = 685
Score = 426 bits (220), Expect = e-123
Identities = 266/282 (94%), Gaps = 3/282 (1%)
Strand = Plus / Minus
Query: 1 acccaaggcagcaatactgaggtaatgcgcagaggagtacacagactggagtgctcatta 60
||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 417 acccaaggcagcaatcctgaggtaacgcgcagaggagtgcacagactggagtgctcatta 358
Query: 61 ctgcagggaggcggggggaacgcaggcaaggagcgggagaatgaaatcaacacgtggcaa 120
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 357 ctgcagggaggcggggggagcgcaggcaaggagcgggagaaagaaatcaacacgtggcaa 298
Query: 121 cataacagggaaggcaacgctggagggtccagatgtttttatacaacaactaaaaatgtt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cataacagagaaggcaacgctggagggtccagatgtttttatacaacaactaaaaatgtt 238
Query: 181 tccaaagaaaatttgtgataaaacggagacattttttaaggc-aa--agaagaaggaaga 237
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 237 tccaaagaaaatttgtgataaaacggagacattttttaaggcgaagaagaagaaggaaga 178
Query: 238 aggaatatggaagaaggaagaaggaagaaggaagaaggaaga 279
||||| | ||||| |||||| ||| || |||||| |||||||
Sbjct: 177 aggaagaaggaaggaggaaggagggaggaggaaggaggaaga 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
