Query= MSMg01no212_c06.b1 MSMg01no212_c06.b1 CHROMAT_FILE:
MSMg01no212_c06.b1 PHD_FILE: MSMg01no212_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:49 2005
(236 letters)
>mm_chr14_113367662_113368297
Length = 636
Score = 439 bits (227), Expect = e-128
Identities = 230/231 (99%)
Strand = Plus / Minus
Query: 1 aatgatagatgagtagctaggttacagagttgtatgcatgcatatatctgtcagtctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatgatagatgagtagctaggttacagagttgtatgcatgcatatatctgtcagtctcaa 372
Query: 61 ggacacaaagtatctttaggtagaagttactttgcagacatcattcttttcattagtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ggacacaaagtatctttaggtagaagttactttgcagacatcattcttttcattagtatt 312
Query: 121 tacctgtgttgtttgataagaagtagcataaggatttggatgaatatgatctgctgttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 311 tacctgtgttgtttgataagaagtagcataaggatttggatgaatatgatcggctgttag 252
Query: 181 taaatctggttctggtagaaataacagcccttaagacttgatttcatgatt 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 taaatctggttctggtagaaataacagcccttaagacttgatttcatgatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no212_c06.g1 MSMg01no212_c06.g1 CHROMAT_FILE:
MSMg01no212_c06.g1 PHD_FILE: MSMg01no212_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:49 2005
(287 letters)
>mm_chr14_113250856_113251542
Length = 687
Score = 482 bits (249), Expect = e-140
Identities = 275/287 (95%), Gaps = 6/287 (2%)
Strand = Plus / Plus
Query: 1 ttttttttttttttgggggggggctatttgttttgttaagacaagtgagcctaaatctct 60
|||||||||||||| || ||| |||| ||||||||||||||||||||||||||||
Sbjct: 207 tttttttttttttt------ggactaattgtgttgttaagacaagtgagcctaaatctct 260
Query: 61 ggtccctatttaagttttaaattcttaaatattttatttttctaaaatgtatggcaatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtccctatttaagttttaaattcttaaatattttatttttctaaaatgtatggcaatga 320
Query: 121 aataactcaaacaaattcacacataataaaactgaaacactaaagcacaaaatattggta 180
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataacccaaacaaattcacacgtaataaaactgaaacactaaagcacaaaatattggta 380
Query: 181 ttagtaaaatatttgctagaataaaattaactgctagtacataaaaataaattacaagaa 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ttagtaaaatatttgctagaataaaattaactgctagttcataaaaataaattacaagaa 440
Query: 241 aattaaaccttcattagtatgtttttttccagttgaaatatcttatt 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aattaaaccttcattagtatgtttttttccagttgaaatatcttatt 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
