Query= MSMg01no213_k24.b1 MSMg01no213_k24.b1 CHROMAT_FILE:
MSMg01no213_k24.b1 PHD_FILE: MSMg01no213_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:47 2005
(323 letters)
>mm_chr14_112146761_112147480
Length = 720
Score = 572 bits (296), Expect = e-168
Identities = 310/316 (98%), Gaps = 3/316 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctggagttgaagaaacaagtgcctgtgagctgtttgcttaggtgctggggac 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gaattcttctggagttgaaggaacaagtgcctgtgagctgtttgcttaggtgctggggac 581
Query: 65 aggaactgaaggactttgaaagagcactagatactcttaactgcagagccatgtctctag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 aggaactgaaggactttgaaagagcactagatactcttaactgcagagccatgtctctag 521
Query: 125 tcctaatgatattttaatgaagtcttttaaaaagatctttgggaataaagaaaagatcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcctaatgatattttaatgaagtcttttaaaaagatctttgggaataaagaaaagatcat 461
Query: 185 ttctcagttacccagactcatgcactagatataggagcatgcagtgatgatatcaactta 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 460 ttctcagttacccagactcatgcactagatataggagcatgcag---tgatatcaactta 404
Query: 245 actcattgaaaaaacaaaagctctacaacattccccagacaatacaaaatttttcagtca 304
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 403 actcattgaaaaaacaaaagctctacaacataccccagacaatgcaaaatttttcagtca 344
Query: 305 gcaagttatctttcta 320
||||||||||||||||
Sbjct: 343 gcaagttatctttcta 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 720
Length adjustment: 9
Effective length of query: 314
Effective length of database: 711
Effective search space: 223254
Effective search space used: 223254
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_k24.g1 MSMg01no213_k24.g1 CHROMAT_FILE:
MSMg01no213_k24.g1 PHD_FILE: MSMg01no213_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:47 2005
(293 letters)
>mm_chr14_112023048_112023740
Length = 693
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 acatcattttattttattatagatattttcaattcatgttcttttttcaaaatagaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatcattttattttattatagatattttcaattcatgttcttttttcaaaatagaagaa 260
Query: 61 caaaagaaaaaatatttggaaatatggaagtcctcatctgtgatgatcgaatgatgacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaagaaaaaatatttggaaatatggaagtcctcatctgtgatgatcgaatgatgacag 320
Query: 121 aatctggactgccaaattaatgctggcccttgtttctgaggctgtacctcctaccagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatctggactgccaaattaatgctggcccttgtttctgaggctgtacctcctaccagaag 380
Query: 181 atctgatgatatgttcatttaaaatgaatttatataagtagagtgggtaagcagataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctgatgatatgttcatttaaaatgaatttatataagtagagtgggtaagcagataaag 440
Query: 241 caaacgtgcaaagtccaaattatctaggctcttctcttgctaatgcaaa 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaacgtgcaaagtccaaattatctaggctcttctcttgctaatgcaaa 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
