Query= MSMg01no213_l12.b1 MSMg01no213_l12.b1 CHROMAT_FILE:
MSMg01no213_l12.b1 PHD_FILE: MSMg01no213_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:49 2005
(313 letters)
>mm_chr14_27889347_27890057
Length = 711
Score = 580 bits (300), Expect = e-170
Identities = 307/310 (99%), Gaps = 2/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattccagcagaccacactgagctggagttaggaagccgtgcccacttcagatcagac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggaattccagcagaccacactgagctggagttaggaagccgtgcccacttcagatcagac 551
Query: 64 agactgcccagtttgccacagtctccatccttgtcccctagtgcgacctacagacttgtg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 550 agactgcccagtttgccacagtctccatccttgtcccctagtgcgacctacagact--tg 493
Query: 124 tgtgtgtgtttgctcttaaagacaaggctatatcctgagttgaagacacttgacctgttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgtgtgtgtttgctcttaaagacaaggctatatcctgagttgaagacacttgacctgttc 433
Query: 184 aagctctcaaacactttggtagcttgatgtagactacaatgctttaactgttgacaaacc 243
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aagctctcaaacactttggcagcttgatgtagactacaatgctttaactgttgacaaacc 373
Query: 244 tgaacaggctcagaaaagtcctcaaaccaccccaggatctgcaatgtcttcaacaaacta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgaacaggctcagaaaagtcctcaaaccaccccaggatctgcaatgtcttcaacaaacta 313
Query: 304 caagcgtgtg 313
||||||||||
Sbjct: 312 caagcgtgtg 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 711
Length adjustment: 9
Effective length of query: 304
Effective length of database: 702
Effective search space: 213408
Effective search space used: 213408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_l12.g1 MSMg01no213_l12.g1 CHROMAT_FILE:
MSMg01no213_l12.g1 PHD_FILE: MSMg01no213_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:49 2005
(289 letters)
>mm_chr14_27722521_27723209
Length = 689
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Plus
Query: 1 cagtcttctggaagagcagcaagcgctttaaccactgctctctctctagccccaagttta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cagtcttctggaagagcagcaagcgctttaaccactgctctctctctagtcccaagttta 260
Query: 61 gaaatttttacacagataaagggactgggacattgttaacactcagaaaccatttattag 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gaaatttttacacagataaagggactgggacattgttaacactcaaaaaccatttattag 320
Query: 121 attgcttagtgcattctaggaactcgggtcttgtgcagcccttgtgataaggagtctgtt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgcttagtgcattctaggaacgcgggtcttgtgcagcccttgtgataaggagtctgtt 380
Query: 181 ctaaagtaaaggcacatccttccattgagatataaagatgctcagatgtgctcggcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaagtaaaggcacatccttccattgagatataaagatgctcagatgtgctcggcttcc 440
Query: 241 ctgagacattgatgtagacttctttcttttcttcaccttcccgctcc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgagacattgatgtagacttctttcttttcttcaccttcccgctcc 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
