Query= MSMg01no213_o12.b1 MSMg01no213_o12.b1 CHROMAT_FILE:
MSMg01no213_o12.b1 PHD_FILE: MSMg01no213_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:04 2005
(310 letters)
>mm_chr14_77796340_77797045
Length = 706
Score = 476 bits (246), Expect = e-139
Identities = 288/304 (94%), Gaps = 4/304 (1%)
Strand = Plus / Minus
Query: 4 ggaattcaaatcctctccctcaagtctaggaacagaagaacaaactgtccaccaagtcat 63
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ggaactcaaatcctctccctcaagtctaggaacagaagaacaaactgtccaccaagtcat 444
Query: 64 cagagcactcgctccctgacccacaggaaatacagagcagccaaaggctagctgttcctg 123
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 443 gagagcactcactccctgacccacaggaaatacagagcagccaaaggctagctgtttctg 384
Query: 124 tccatgccaccaccaccattaagaccaaatatattcattagcctcccatggcatttggac 183
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 tccatgccaccaccaccattaagaccaaatatattcattagcctcctatggcatttggac 324
Query: 184 ctaatgatgtggagtttgttacacccaactaagtgagtatcctatcggaggactggtccc 243
||||||||||||||||||||| |||||||| |||||| |||| ||||||||||||||
Sbjct: 323 ctaatgatgtggagtttgttatacccaact----gagtattctattggaggactggtccc 268
Query: 244 cttgttaagagatgcagcatgtcagtttttatctctaaggtcccaggaagtggcactggc 303
||||||||||||||||||||||||||||||||| ||| ||| |||||||||| |||||||
Sbjct: 267 cttgttaagagatgcagcatgtcagtttttatcactagggttccaggaagtgacactggc 208
Query: 304 cttg 307
||||
Sbjct: 207 cttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 706
Length adjustment: 9
Effective length of query: 301
Effective length of database: 697
Effective search space: 209797
Effective search space used: 209797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_o12.g1 MSMg01no213_o12.g1 CHROMAT_FILE:
MSMg01no213_o12.g1 PHD_FILE: MSMg01no213_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:04 2005
(247 letters)
>mm_chr14_77672430_77673076
Length = 647
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%)
Strand = Plus / Plus
Query: 1 tgttttacagactccctcgccactctcccctttccacatctcctcctcctcttcttgact 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttttacagactcccttgccactctcccctttccacatctcctcctcctcttcttgact 260
Query: 61 ctttcgaggcttttctcactccccctttcccctgctttattcattcacttacgcactgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttcgaggcttttctcactccccctttcccctgctttattcattcacttacgcactgcc 320
Query: 121 tttctgtcatgtaccaaaaattgctctgggagaaaatgttaagcacgctaccattcagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctgtcatgtaccaaaaattgctctgggagaaaatgttaagcacgctaccattcagac 380
Query: 181 gacgacgggcagtcacacaagagccgccgatgttatgcagccatatacgacacatgtttt 240
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 381 gacgacgggcagtcacacaagagacgccgatgttatgcagccatatacaacacatgtttt 440
Query: 241 ccagaca 247
|||||||
Sbjct: 441 ccagaca 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
