Query= MSMg01no214_e15.b1 MSMg01no214_e15.b1 CHROMAT_FILE:
MSMg01no214_e15.b1 PHD_FILE: MSMg01no214_e15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:34 2005
(527 letters)
>mm_chr14_77641596_77642522
Length = 927
Score = 934 bits (483), Expect = 0.0
Identities = 516/527 (97%)
Strand = Plus / Plus
Query: 1 gagataataatacacattttgctaaatatcctcctaagagtttttgtcttgcccttctta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 201 gagataataatacacattttgctaaatatcctcctaagagtttttgccttggttttctta 260
Query: 61 ttcttcggagcatagaaacatacttattttaaagtagaactatattattttaacccaaaa 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcttcagagcatagaaacatacttattttaaagtagaactatattattttaacccaaaa 320
Query: 121 tttgaaaaaattgtaatgtgtatcactgattatgggtatatcatattactatggaatagc 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tttgaaaaaattgtaatgtgcatcactgattatgggtatatcatattactatgaaatagc 380
Query: 181 atgactaggcttactggtcgaagggctgctataatttattgctatgatttattggctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgactaggcttactggtcgaagggctgctataatttattgctatgatttattggctccc 440
Query: 241 tgttgatttatgttgtttactaggctgaattaggatgacaattcttagtcgtggtaaact 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttgatttaagttgtttactaggctgaattaggatgacaattcttagtcgtggtaaact 500
Query: 301 ctttctgtgagatttttcagtccactttcttacctgtggggttagcagtgctcacctcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctttctgtgagatttttcagtccactttcttacctgtggggttagcagtgctcacctcac 560
Query: 361 cttaccttctttaactccccaggacttcccacctccccttatttccctgtgtaatgatca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttaccttctttaactccccaggacttcccacctccccttatttccctgtgtaatgatca 620
Query: 421 ttgaaaatgcgaatttattttattttgaagtttaaacactttgggtcaatttggaggcct 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 621 ttgaaaatgcgaatttattttattttgaagtttaaacactttgggtcaatttgggggcct 680
Query: 481 ttgtgtgcttctcttgtcatttggtttgtctttcgcagcagcagcag 527
||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 681 ttgtgtgcttcccttgtcatttggtttgtctttcacagcagcagcag 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_e15.g1 MSMg01no214_e15.g1 CHROMAT_FILE:
MSMg01no214_e15.g1 PHD_FILE: MSMg01no214_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:34 2005
(284 letters)
>mm_chr14_77741468_77742152
Length = 685
Score = 518 bits (268), Expect = e-151
Identities = 283/294 (96%), Gaps = 10/294 (3%)
Strand = Plus / Minus
Query: 1 ctaaaaatacacacttcttctcctttctatagcagtgaaagtcatttccaaccaccctac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 333 ctaaaaatacacacttcttctcctttctatagcagtgaaagtcattttcaaccaccctac 274
Query: 61 aaaagacgggatgtcagtgtgtgttagcctcagttaagctgtttcaaatcctatccctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aaaagacgggatgtcagtgtgtgttagcctcagttaagctgtttcaaatcctatccctgc 214
Query: 121 aattg----------gggggggatgcgttcaaattctgatgagctagccaaaatttcctc 170
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 aattggtgggggggcgggggggatgcgttcaaattctgatgagctagccaaaatttcctc 154
Query: 171 ggtgctgccacactcctggactgcctgcacagtcttagtgagcgcatttagaactcaagg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ggtgctgccacactcctggactgcctgcacagtcttagtgagcgcatttagaactcaagg 94
Query: 231 aaccatagggcttatttttagaggaaaaatggccacatattccgctcccccacc 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aaccatagggcttatttttagaggaaaaatggccacatattccgctcccccacc 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
