Query= MSMg01no215_d04.b1 MSMg01no215_d04.b1 CHROMAT_FILE:
MSMg01no215_d04.b1 PHD_FILE: MSMg01no215_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:47 2005
(240 letters)
>mm_chr14_47918531_47919170
Length = 640
Score = 443 bits (229), Expect = e-129
Identities = 235/237 (99%)
Strand = Plus / Minus
Query: 2 aaagaacattccaacctcggcagctgcaggaaaaagtttttgaagggaagtgttctagag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aaagaacattccaacctcggcagctgcaggaaaaagtttttgaagggaagtgttctagag 379
Query: 62 agtggctccaatactccacgactaaaaactgccctcctccccacccaaggagcgccacta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agtggctccaatactccacgactaaaaactgccctcctccccacccaaggagcgccacta 319
Query: 122 acaaagacttccgagggcgactccagcttctgagggtttggcctccaaacaggcctttcg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acaaagacttccgagggcgactccagcttctgagggtttggcctccaaacaggcctttcg 259
Query: 182 cacatgggggaggggttaacacgtgtgtgtttctgtagtaggctgttacacatctac 238
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cacatgggggagggggcaacacgtgtgtgtttctgtagtaggctgttacacatctac 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_d04.g1 MSMg01no215_d04.g1 CHROMAT_FILE:
MSMg01no215_d04.g1 PHD_FILE: MSMg01no215_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:47 2005
(292 letters)
>mm_chr14_47894435_47895126
Length = 692
Score = 526 bits (272), Expect = e-154
Identities = 287/292 (98%), Gaps = 1/292 (0%)
Strand = Plus / Plus
Query: 1 ttttccatataaacatcaatagcagactcttagcttccattctatataacccagatgagt 60
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 201 ttttccatataaacatcaatagcagactcttagcttccattctataaaacggagatgagt 260
Query: 61 ttaatgttctctgcggctcttccttggcataaaattatttcttggtaataacgtgagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatgttctctgcggctcttccttggcataaaattatttcttggtaataacgtgagaga 320
Query: 121 aagacgagcacatgatttctgcaacagcaaggactgtgtctgctcagccaccatcacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagacgagcacatgatttctgcaacagcaaggactgtgtctgctcagccaccatcacatc 380
Query: 181 cccagtaccagctcgggacacacagagactataaccaatgtctgaatatatgagctcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccagtaccagctcgggacacacagagactataaccaatgtctgaatatatgagctcaac 440
Query: 241 gagtaccccattaaattattaaaatagccatgtgaataggttattgcttgtt 292
|||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtaccccaa-aaattattaaaatagccatgtgaataggttattgcttgtt 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
