Query= MSMg01no218_o03.b1 MSMg01no218_o03.b1 CHROMAT_FILE:
MSMg01no218_o03.b1 PHD_FILE: MSMg01no218_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:01 2005
(319 letters)
>mm_chr14_122076775_122077492
Length = 718
Score = 563 bits (291), Expect = e-165
Identities = 309/315 (98%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcccattcagttaccaacattcccatcactgtggctaacaaccacctatctgcagc 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcccattcagttaccaacattcccatctctgtggctaacaaccacctatctgcagc 264
Query: 65 tggggggaatcctacacttgtagccttctccggtgcctgcactcacatgcatagacacat 124
| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct: 265 t-gggggaatcctacacttgtagcctcctcctgtgcctgcactcacatgcatagacacat 323
Query: 125 acacaaacacattgtatcgagaatttaaaaataacctacaacaccaagaaatcagaaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acacaaacacattgtatcgagaatttaaaaataacctacaacaccaagaaatcagaaaca 383
Query: 185 acaataaaagcagtctaaacaaagaccaagtcacagtgctagagaggatgaacccgatgg 244
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 acaataaaggcagtctaaacaaagaccaagtcacagtgctggagaggatgaacccgatgg 443
Query: 245 agggagaagaaaagttcactctcaggactctctgagcctgctgtcaccttccggtgacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agggagaagaaaagttcactctcaggactctctgagcctgctgtcaccttccggtgacat 503
Query: 305 ctgggaatgggccgg 319
|||||||||||||||
Sbjct: 504 ctgggaatgggccgg 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no218_o03.g1 MSMg01no218_o03.g1 CHROMAT_FILE:
MSMg01no218_o03.g1 PHD_FILE: MSMg01no218_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:01 2005
(290 letters)
>mm_chr14_122172907_122173595
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 tcctttgcgcagctacctcagttgtctacattagggcacattgtagatcatttcttgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcctttgcgcagctacctcagttgtctacattagggcacattgtagatcatttcttgact 429
Query: 61 gccacctccccccgaaaaggtgtgaactgaatcttcttttctgctctttgtcttttctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gccacctccccccgaaaaggtgtgaactgaatcttcttttctgctctttgtcttttctgt 369
Query: 121 gtcacatctgctcagtcatggaggccttcctttctttccttttctgtgtaattccctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 368 gtcacatctgctcagtcatggaggccttcctttctttccttttctgtgtaatttcctctt 309
Query: 181 gtgctttatttgtgcacttaggccaagtagtagttaatcttccatcctttgagccgcccc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 308 gtgctttatttgtgcacttaggccaagtagtagttaatcttccatcctttgagccg-ccc 250
Query: 241 ccccccccccgtgcagagatggtaagagcctcagtgagtgatataatgg 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccccccccccgtgcagagatggtaagagcctcagtgagtgatataatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
