CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGCCTTTTCATGATCAATAGGCTTTCCCTTAGAGGGATCATTAGA
ACACAAGTTGACATTCATTAGTATTCAGAAGATGAACAACATAATGCATT
TGCTTTTTGTTCTGCAATCTGGTGTTATTTACTTCAATATGCAAATCTAT
ATCATGGCAACAAATAAATATGTGACTATAGTTCCCTAACTTTCACATTT
AACAATACAGAAATGACTCTCTTTGGGTTAGCTCTATGTTAAAATGATTT
GATAGCTTAGTCATAGAATCTTGTTGTAAGGAATAAGTATAATTTTATTT
ATCATGAAGTTTTGAGATTAAAGGCAGAACCTGAGTAAGAATGCATTTTA
TCCCAGCTATTTCCTTCCCTACCCCTTTTAATACCACTTTCCCTCCCTAC
AGCCATCCCAGAGGTTTGTTTATTTCCCCTTCTCAGTGAGAATCAAGCAT
CCTCCCTCAGGCCCTCCTTGTTACTTAGGTCTTTGGATCTGTGGATTATA
GCATGGTTATTCTGTACTTTATGGCTAATATCCTCTTATAAGTGGGTATA
TGTCATGAGTGTCTTTCTGGGTGTGGGTTACCTCACTCAGGATGATCTTT
TCTAGTTCCATCCATTTGCTGAAATTTTCTTTTTTTAAAATATTTTTATT
ACATATTTTCCTCAATTACATTTCCAATGCTATCCCAAATGTC

TCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGGTCTATCTTCATTCAGAGAT
GATGCACCTAACCATCAAGAGACTGGCGGCCCCAGAGAGTTAGAGGTTAG
ATGTGGTGGAGGGTAGGGGCATCCATTTGGAGACATGGTGTAGTGGGGAA
GAGTTGNGNNNNNNNNNNNTNNNTTTTTTTTTTTTTTTTTTTTTTTTTTT
NTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTNTTTTTTTTTTTTTTNNNN
NNNTNNTTNTNNNNTTTTTTTTTTTTNNTGTTTNTTTTTTTTTTTTTTTG
NTGTTTTTTTTTTTTTCCCCCCCCCCCCCCCCGGGGGGTGNTTTTTTTTT
TTTTGTTTTTTTTTCCCCCCCCCTTCTACAAAAAAAAATATCTGGGGGGG
GGGTTCTCCCTTCTTCTTTTCCCCTTTCTCTTCTCCTTCTCTCTTCCATT
CTCTCGCCTTTCTTTCTACTCTCTCTCCTTCTCCTTCTCTCATTTTCTTC
TCTCTTTTTTTTCCACCTACCTCTCTCCTCATTTCCTCTTCTCTCTCTCT
TTCTCTCTTTTTTTTTTTTTTCTTTTCTCCCTATCTCTCATCTTCCCTTC
ACTCTCTCTTCCGCTCTCTCCTTTCTCTGCCTCTTTTCTTTCCTCTTTTC
TTTTCTTCTCCCTTCTTCTTCTTTTTCCACTCTTTTTCTCTCTTGTCTGT
TCTCTTTCTATTCTTTCTCTATCCCTCTATTTTTCTACG

Query= MSMg01no231_a10.b1 MSMg01no231_a10.b1 CHROMAT_FILE:
MSMg01no231_a10.b1 PHD_FILE: MSMg01no231_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:12 2005
         (698 letters)



>mm_chr14_107827320_107828417
          Length = 1098

 Score = 1214 bits (628), Expect = 0.0
 Identities = 676/692 (97%), Gaps = 4/692 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagccttttcatgatcaataggctttcccttagagggatcattagaacacaagtt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagccttttcatgatcaataggctttcccttagagggatcattagaacacaagtt 264

                                                                       
Query: 65  gacattcattagtattcagaagatgaacaacataatgcatttgctttttgttctgcaatc 124
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacattcattagtatttagaagatgaacaacataatgcatttgctttttgttctgcaatc 324

                                                                       
Query: 125 tggtgttatttacttcaatatgcaaatctatatcatggcaacaaataaatatgtgactat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtgttatttacttcaatatgcaaatctatatcatggcaacaaataaatatgtgactat 384

                                                                       
Query: 185 agttccctaactttcacatttaacaatacagaaatgactctctttgggttagctctatgt 244
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 agttccctaactttcacatttaacaatacagaaatgactctcttagggttagctctatgt 444

                                                                       
Query: 245 taaaatgatttgatagcttagtcatagaatcttgttgtaaggaataagtataattttatt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaaatgatttgatagcttagtcatagaatcttgttgtaaggaataagtataattttatt 504

                                                                       
Query: 305 tatcatgaagttttgagattaaaggcagaacctgagtaagaatgcattt-tatcccagct 363
           |||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||
Sbjct: 505 tatcatgaagttttgagattaaaggccgaacctgagtaagaatgc-tttgtatcccagct 563

                                                                       
Query: 364 atttccttccctaccccttttaataccactttccctccctacagccatcccagaggtttg 423
           ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 564 atttccttccctaccccttttcataccactttccctccctacagcaatcccagaggtttg 623

                                                                       
Query: 424 tttatttccccttctcagtgagaatcaagcatcctccctcaggccctccttgttacttag 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttatttccccttctcagtgagaatcaagcatcctccctcaggccctccttgttacttag 683

                                                                       
Query: 484 gtctttggatctgtggattatagcatggttattctgtactttatggctaatatcctctta 543
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtctttggatctgtggattgtagcatggttattctgtactttatggctaatatcctctta 743

                                                                       
Query: 544 taagtgggtatatgtcatgagtgtctttctgggtgtgggttacctcactcaggatgatct 603
           |||||| ||| ||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 744 taagtgagtacatgtcatgagtgtctttttgggtgtgggttacctcactcagtatgatct 803

                                                                       
Query: 604 tttctagttccatccatttgctgaaattttc-tttttttaaaatatttttattacatatt 662
           |||||||||||||||||||||||||| |||| ||||||||| || |||||||||||||||
Sbjct: 804 tttctagttccatccatttgctgaaaatttcatttttttaatat-tttttattacatatt 862

                                           
Query: 663 ttcctcaattacatttccaatgctatcccaaa 694
           ||||||||||||||||||||||||||||||||
Sbjct: 863 ttcctcaattacatttccaatgctatcccaaa 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 698
Length of database: 1098
Length adjustment: 10
Effective length of query: 688
Effective length of database: 1088
Effective search space:   748544
Effective search space used:   748544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)