CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCAGGGAGATCCGTGGACCCACAGCTTCTATATCCAGGAATTCAT
CCAACATATACTGAAATACTTGGGACAAGATTTTACCTCTGATTGATCAT
GCACAGACTCTTTTCTAGTTGTTGCCTCTTAGACCATATAACAACCATTT
ACATAATGTTAGACATTTGATTTACATAGAGAAGATAATGTGTATAGGCA
AGCATATACATGTATGGCATGTATATGAACATGCCATACATTTGATATAA
GAAGCCTTGGAAGTACTGGGACATAATACTTCCAGAAAACAACTGATGAC
TGCTTCACATAGCAGGAATGCAACTAACAATGCCTAAGTACTGCTGTGAA
TGTTTCATCTGTGCTGAGTCTTTGACTGGCATGACAGGGTTACAAGCTAT
TATTTTTAGTAATGCATGTGGAAACTGGAGCAAAATAATGTAGTTCTGGT
TCACAAATGACACATTAATGTAATACCAAATTATCTTCTCTCTCACACTA
TACATACATACACACACACACACACACACACACACACACACACATTTTCC
TGATAGCTCTTAAGGATAGCATGATGATGCATCTTTGGCACCTATGACCA
CTTCTTCATGATCGGGAACTGAGGATAATATGTAAATTGGCTGTATAAAC
GATGAGCTAAAATTATATTCTTTTAAGTATTTTATATAATACAATGATTA
G

TCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTCTTCATGATCCCCCACACC
TTACACTCTGTGTTTCATACAAGAGGAGCTCAAGAAAATCTGTTGAGTAA
TTTAAAATGAAGAGAATAGGGGAGGAAGAAAGGGAGGGGTGATGGAGGGA
ATGCAGGAAGAAGGGAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTTTTTTTTTNTTTTTTTNNTTNTTTTTTTT
TTNTTTTTTTTTTTTTTTTCCCCNNCCCGNNCCCCNNNNNNNNNGNNNNG
GGGGGGGNGGGTTTGCCCCCCCCACAAAAAAAAAAAAAAAACTGTGGGGG
GGGGGGGTTTCCATTCACATCTCCCCTCGCCTCCAGTTCTCCCTACTCTC
TGCTCATCTTTTCTACACCCCTCTCTCTACCTTGTCGCTTACTCTCCTCT
TCCAGTAACACTAGCCCCTCCTACTTCTCCCTTATTCTCTCTCTACCTTT
CCTTCTATTTTTCTCCCTCTCTCTCTCTTATCTCTTATCGCTCGTTATCG
TTCCCTCCACTCCCTCTCCCTCACCCTCTTTCCCATTATCATCAAACTTT
GACTATACGGCTCTTACCTATAATATCCTTCTTCACTCTCTCTAGTAATT
ATATATCTCTTCTTCATTAATCTCACTATG

Query= MSMg01no231_c10.b1 MSMg01no231_c10.b1 CHROMAT_FILE:
MSMg01no231_c10.b1 PHD_FILE: MSMg01no231_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:22 2005
         (706 letters)



>mm_chr14_36607006_36608111
          Length = 1106

 Score =  754 bits (390), Expect = 0.0
 Identities = 590/716 (82%), Gaps = 109/716 (15%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccagggagatcc-gtggacccacagcttctatatccaggaattcatccaacatatact 67
           ||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 282 tcccagggaga-cctgtggacccacagcttctatatccaggaattcatccaacacatact 340

                                                                       
Query: 68  gaaatacttgggacaagattttacctctgattgatcatgcacagactcttttctagttgt 127
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gaaatacttgggaaaagattttacctctgattgatcatgcacagactcttttctagttgt 400

                                                                       
Query: 128 tgcctcttagaccatataacaaccatttacataatgttagacatttgatttacatagaga 187
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tgcctcttagaccatataacaaccatttacataatgttagacatttgatttacatagaga 460

                                                                       
Query: 188 agataatgtgtataggcaagcatatacatgtatggcatgtatatgaacatgccatacatt 247
           ||||||||| |||||||||||||   || ||| |  ||| || |||||||||||||| ||
Sbjct: 461 agataatgtatataggcaagcatg--ca-gta-g--atg-at-tgaacatgccatacctt 512

                                                                       
Query: 248 tgatataagaagccttggaagtactgggacataatacttccagaaaacaactgatgactg 307
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgatataagcagccttggaagtactgggacataatacttccagaaaacaactgatgactg 572

                                                                       
Query: 308 cttcacatagcaggaatgcaactaa----ca--atg-----------cctaagtactgct 350
           |||||||||||||||||||||| ||    ||  |||           |||||||||||||
Sbjct: 573 cttcacatagcaggaatgcaac-aatgctcattatgggcatccctggcctaagtactgct 631

                                                                       
Query: 351 gtgaatgtttcatctgtgctgagtctttgactggcatgacagggttacaagctattattt 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gtgaatgtttcatctgtgctgagtctttgactggcatgacagggttacaagctattattt 691

                                                                       
Query: 411 ttagtaatgcatgtggaaactggagcaaaataatgtagttctggttcacaaatgacacat 470
           |||  |   ||              ||                   ||||     |||| 
Sbjct: 692 tta--a---ca--------------ca-------------------caca-----caca- 707

                                                                       
Query: 471 taatgtaataccaaattatcttctctctcacactatacatacatacacacacacacacac 530
                                       |||||   |||      |||||| ||||||||
Sbjct: 708 ----------------------------cacac---aca------cacacagacacacac 730

                                                                       
Query: 531 acacacacacacacacacattttcctgatagctcttaaggatagcatgatgatgcatctt 590
           ||||| | | ||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 731 acacagagagacacacacattttcctgatagctcttagggatagcatgatgatgcatttt 790

                                                                       
Query: 591 tggcacctatgaccacttcttcatgatcgggaactgaggataatatgtaaattggctgta 650
           |||||||| ||||  |||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 791 tggcacctgtgactgcttcttcatgatcgggaactgagggtaatatgtaagttggctgta 850

                                                                   
Query: 651 taaacgatgagctaaaattatattcttttaagtattttatataatacaatgattag 706
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 taaacgatgagctaaaattatattcttttaagtattttatataatacaatgattag 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)