Query= MSMg01no232_c24.b1 MSMg01no232_c24.b1 CHROMAT_FILE:
MSMg01no232_c24.b1 PHD_FILE: MSMg01no232_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:37 2005
(319 letters)
>mm_chr14_105056589_105057307
Length = 719
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 gaattctctttcaa-tgtcctaggtctgaagaccatgtgagacatccaagtagcaagtcc 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctctttcaaatgtcctaggtctgaagaccatgtgagacatccaagtagcaagtcc 263
Query: 64 caggtggcatttggattaatgtgtctggagatgagagagaggtagggcagaagttagaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggtggcatttggattaatgtgtctggagatgagagagaggtagggcagaagttagaca 323
Query: 124 gtcaaaagccaactctgcataagtgttaatttgttgtgtcagagtgggcgagagtcccaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtcaaaagccaactctgcataagtgttaatttgttgtgtcagagtgggcgagagtcccaa 383
Query: 184 agccaagtatgtggtctgaggagacttaaaactaggaagggagttcgtggaacatcaggc 243
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 agccaagtatgtggtctgaggagacttaaaactaggaaggaagttcgtggaacatcaggc 443
Query: 244 ttcagagagcatctaacccagcagaagtgacagccacttcagaggacgtgctcctgagac 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttcagagagcatccaacccagcagaagtgacagccacttcagaggacgtgctcctgagac 503
Query: 304 ttgtgtcggctgtggt 319
||||||||||||||||
Sbjct: 504 ttgtgtcggctgtggt 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_c24.g1 MSMg01no232_c24.g1 CHROMAT_FILE:
MSMg01no232_c24.g1 PHD_FILE: MSMg01no232_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:48:37 2005
(292 letters)
>mm_chr14_105145586_105146278
Length = 693
Score = 526 bits (272), Expect = e-154
Identities = 288/294 (97%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 ttttaagattttaacttagggtgaatgatctgtaaggagtcactctatggactcagtggc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 493 ttttaagattttaacttagggtgaatgatctgtaaggagtcactctatgggctcagtggc 434
Query: 61 ttcatgcttgtggtacaggtgtgagggcctcagggttttgttgttgtcatttttttattt 120
|| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 433 ttaatgcttgtggtacaggtgtgagggcctcagggttttgttgttgtca-ttttttattt 375
Query: 121 tgttttgtttttatctccattgctcatgtaaaaagccaggcatgaga--gtgtatactgt 178
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 374 tgttttgtttttatctccattgctcatgtaaaaagccaggcatgagagtgtgtatactgt 315
Query: 179 caactcagattcttgcttctggttgtttattgctgagtcatagcttctctcttaaaggta 238
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 314 caactcagattcttgcttctggttgtttatcgctgagtcatagcttctctcttaaaggta 255
Query: 239 gagcttttttatgactgactcatagaacagccttggctggttctaggcttcctg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gagcttttttatgactgactcatagaacagccttggctggttctaggcttcctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
