Query= MSMg01no232_m19.b1 MSMg01no232_m19.b1 CHROMAT_FILE:
MSMg01no232_m19.b1 PHD_FILE: MSMg01no232_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:22 2005
(630 letters)
>mm_chr14_28572967_28573995
Length = 1029
Score = 1025 bits (530), Expect = 0.0
Identities = 577/600 (96%), Gaps = 15/600 (2%)
Strand = Plus / Minus
Query: 38 aacaacatataaacatacagccacttcaccttcta---ttcttcccagaggccataaagg 94
||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 829 aacaacatataaacatacagccacttcaccttctaactttct----agaggccataaagg 774
Query: 95 aataattcaatagtgaaagttataaagacttgattgggaataatacattaccagtggcag 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 aataattcaatagtgaaagttataaagacttgattgggaataatacattaccagtggcag 714
Query: 155 ggattagaaggaaaagccaccttgcttacttgtacagtagaataagctaaccacaacttg 214
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 713 ggattagaaggaaaagccaccttgcttacttgtacaggagaataagctaaccacaacttg 654
Query: 215 cacaaagccactgccaagacagcggaacacctagttgcaagccacaggcaccaagcacgc 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cacaaagccactgccaagacagcggaacacctagttgcaagccacaggcaccaagcacgc 594
Query: 275 atggtcccgctctttccattcttctagttcttcgaactggatcttgttcggtactggaag 334
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 agggccccgctctttccattcttctagttcttcgaactggatcttgttcggtactggaag 534
Query: 335 ccagagggattcgattaccacataattagcatccccc----catatgcaacaggcagatt 390
|||||||||||||||||||||||||||||||| | ||| |||||||||||||||
Sbjct: 533 ccagagggattcgattaccacataattagcat----cagggcatgtgcaacaggcagatt 478
Query: 391 tccacactcgggtcacatctttgagccagatgcctcccctccactgcataccttggatgg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tccacactcgggtcacatctttgagccagatgcctcccctccactgcataccttggatgg 418
Query: 451 tacagctgccccaaccacactctgaaccccccactgtttgccagaggctctgaggtttgg 510
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 417 tacagctgccccaaccacactctgaacccctcaccgtttgccagaggctctgaggtttgg 358
Query: 511 gacttggaacagatgagtcattctagccaggatgaagtcacttctctctgatatgacttc 570
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gacttggaacagatgaatcattctagccaggatgaagtcacttctctctgatatgacttc 298
Query: 571 tcagaaaacacctttagggaagttttggggggttaaagttcttccgcctaggcgcttaaa 630
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 297 tcagaaaacacctttagggaagtttttgggggttaaagttcttccgcctaggcgcttaaa 238
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1029
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1019
Effective search space: 631780
Effective search space used: 631780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no232_m19.g1 MSMg01no232_m19.g1 CHROMAT_FILE:
MSMg01no232_m19.g1 PHD_FILE: MSMg01no232_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:22 2005
(284 letters)
>mm_chr14_28483841_28484524
Length = 684
Score = 495 bits (256), Expect = e-144
Identities = 277/284 (97%)
Strand = Plus / Plus
Query: 1 tattgttcccttctcccctcctcagtgcctgtgcaggagaatatacagctaaagaggtca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tattgttcccttctcccctcctcagtgcctgtgcaggagaatatacagttaaagaggtca 260
Query: 61 aagggcagatgggatatgactgtgttgatgtatgtgttgatgtacacttatgcctgcctc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagggcagatgggatctgactgtgttgatgtatgtgttgatgtacacttatgcctgcctc 320
Query: 121 tacgcaagattcttcagttgggtgtgagaacttgcttccacatctaccctgatcccacag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 tacgcaagattcttcagttgggtgtgagaacttgcttccacatctaccctgatcccacgg 380
Query: 181 tggttatatctgttccgttggaaaccctgtagtctccacactcagagagaacttggggat 240
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtaatatctgttctgttggaaaccctgtagtctccacactcagagagaacttggggat 440
Query: 241 aaagagttatggtggctttggtgtcttaccatactgatcccaga 284
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagagggatggtggctttggtgtcttaccatactgatcccaga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
