Query= MSMg01no233_e19.b1 MSMg01no233_e19.b1 CHROMAT_FILE:
MSMg01no233_e19.b1 PHD_FILE: MSMg01no233_e19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:59 2005
(688 letters)
>mm_chr14_93272856_93273943
Length = 1088
Score = 1278 bits (661), Expect = 0.0
Identities = 679/686 (98%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 5 gaattccagaagattaagacagggagatctccgagttcaggtcaactgggattaaaggta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccagaagattaagacagggagatctccgagttcaggtcaactgggattaaaggta 262
Query: 65 tggtggcacacacctttaatctgggatacacctgctggagacctacataaagacattgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggtggcacacacctttaatctgggatacacctgctggagacctacataaagacattgga 322
Query: 125 agaaggaatacacac--tctctctctcctttgcctgcttgctgtgtgggactgagtaact 182
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaaggaatacacacactctctctctcctttgcctgcttgctgtgtgggactgagtaact 382
Query: 183 gctagatccttggacttgcatttacaggtgctactgaccattgttgggagttggactgca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gctagatccttggacttgcatttacaggtgctactgaccattgttgggagttggactgca 442
Query: 243 gactataagtcatcaacaaattactttactatatagagactacccataagttctgtgact 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gactataagtcatcaacaaattactttactatatagagactacccataagttctgtgact 502
Query: 303 ctagagaacccttactaatacagtagattcccagtagttctgtagtttttgactagtgaa 362
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 503 ctagagaacccttactaatacagtagattcccaatagttctgtagtttttgactagtgaa 562
Query: 363 ataacatggaagaaaaattttagatgctctggcagtggcattgataacatgtgaataggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ataacatggaagaaaaattttagatgctctggcagtggcattgataacatgtgaataggt 622
Query: 423 agcttggtgtctaggaaagaagtctggaaattgaatcctggactctgatccatgaaggct 482
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 623 agcttggtgtctaggaaagaagtctggaaattgaatactggactctgatccatgaaggct 682
Query: 483 ttcttcttagggtagcatcagtactccaagaggatcatataatttgctgtttggtgagaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttcttcttagggtagcatcagtactccaagaggatcatataatttgctgtttggtgagaa 742
Query: 543 taatagccttgtccagaatttacacaattggtgaaagaaagagaaaaaatactttgtcat 602
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcatagccttgtccagaatttacacaattggtgaaagaaagagaaaaaatactttgtcat 802
Query: 603 ctgttcctcanatgtagaagagaaggtgaaaatttccaagaggaatgagactgatagggt 662
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctgttccccaaatgtagaagagaaggtgaaaatttccaagaggaatgagactgatagggt 862
Query: 663 agaaagggagaaagaggaagaagagg 688
||||||||||||||||||||||||||
Sbjct: 863 agaaagggagaaagaggaagaagagg 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_e19.g1 MSMg01no233_e19.g1 CHROMAT_FILE:
MSMg01no233_e19.g1 PHD_FILE: MSMg01no233_e19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:59 2005
(650 letters)
>mm_chr14_93374976_93376025
Length = 1050
Score = 895 bits (463), Expect = 0.0
Identities = 581/635 (91%), Gaps = 31/635 (4%)
Strand = Plus / Minus
Query: 1 tccagcaccatgcctacctgaatgctgccatattcctaccttgaagataacggatgaagc 60
|||||||||||||||||||||||||||||||||| || |||||||||||| |||| ||||
Sbjct: 902 tccagcaccatgcctacctgaatgctgccatattactgccttgaagataatggattaagc 843
Query: 61 ctcagagcctgtaagccagccccaattaaaggttgtccttatgagagttgccttgttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 842 ctcagagcctgtaagccagccccaattaaaggttgtccttatgagagttgccttggacat 783
Query: 121 -gccttggtcttcacagcagtaaaacccta-actaagacagccacacttacttcaacaag 178
||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 782 ggccttggtcttcacagcagtaaaaccctagagtaagacagccacacttacttcaacaag 723
Query: 179 accacatctcttaatagtgccactttctaagggccaagcattcatatacatgattctctg 238
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 722 accacatctcttaatagtgccactttctaggggccaagcattcatatacatgattctccg 663
Query: 239 gggagcattcctattcaaaccaccacacttactaaatattattcaaatgtatgtaatcta 298
|||| ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 662 gggaacattcctattcaagccactacacttactaaatgttattcaaatgtatgtaatcta 603
Query: 299 aatagaagaaaaccaacactcataacttctattcaaatgatcttttattctgatggcaaa 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 602 aatagaagaaaaccaacactcataacttctattcaaatgatcttttattctgattgcaaa 543
Query: 359 taagcaggttttttccaaagtaaatctcagtttctttttctagccaagacttaggactca 418
||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 542 taagcagattttttccaaagtaaatctcagtttctttttctaaccaagactcaggactca 483
Query: 419 aacaaataaattacacagaaagaa----agaaagaaagaaagaaagaaagaaagaaagaa 474
|| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 482 aataaataaattacacagaaagaaagggagaaagaaagaaagaaagaaagaaagaaagaa 423
Query: 475 agaaagaaagaaagaaagaaagaaagaa----------------agagagaggaaggaag 518
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 422 agaaagaaagaaagaaagaaagaaagaaagagagagagagagagagagagaggaaggaag 363
Query: 519 gatgga---aa-gaaggaaagaagagagagagaaag--agagag-agagagagagaaagg 571
|||||| || |||||||||||||||||||||||| ||| || ||| ||||||||||
Sbjct: 362 gatggaaggaaggaaggaaagaagagagagagaaagaaagaaagaagaaagagagaaaga 303
Query: 572 aaggaaggaaggaaggaaggaaggaagaaagaaag 606
||| || ||||||||||||||| |||||||||||
Sbjct: 302 aag--agaaaggaaggaaggaagaaagaaagaaag 270
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 226
Number of extensions: 92
Number of successful extensions: 73
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
