CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTTAAGTCACACATTTCCATAACAGAGATACAATGTGTCAGGGCT
TCAACCTGTTCACTGGGAGAAGTGACTTAGCTCCTAAAACCATGCCTAAA
AGCTATCAAGGGTGGTCTGGAAAAAATCAAGAGAGCGCCAGGAACAGCTC
AAATAATCAGGATAGTTCAAGAGACAAAGAACCCTGAGGAAGGCTGCTTA
TGAATTCTGAGCAAAAAGCAATGCTGGAGCTACTACAATACCCAATCTCA
GATTATATCACAAAGCCAAATGAAAACTATGAAGACTATGGATCTTCCAC
TTAAACCCAGCAGAGGGCCCCAAGGTCCCCAGAGGACTCTCCCTGACTCA
GGCCCTCTAGCACGCCCAGCGCCTCAGGATCATGGGTGAGTGGAACACAA
CATCAGTTCGAAACAATCCCAGAGCATCTTGTGCCAGCACTAACAGGGAC
AAAGGAACCTGGCTTGACTACAGGCTGGGATTCATTCCAGTAGGGGCCAG
CCTCGAGCCATCTTCCTCGCAAACCTGGCAGAGGGCCCCAAGGTCCCCAA
AGGACTCTCCATGCCACAGGACCCCTAGCACACCCAGGACCTTGGGATCT
CTTGAGAGCACGTGAGCAGCAGAAGCAACAGAGCTTTTTGGACAGGGTCC
CTTCAGGNCTTCATCCTCA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTCAAC
ATGAATGGATGCTGAATTTTGTGAACTCGCTTTTTCAGTATCTAATGAAA
TATTCATGGGTTTTTTTGGTTGTTGTTATTGGTTTTTTTTTTTGAGTTTG
TTTATGTTTNNNTTNNTTCCTTTTTTTTTTTTTTTTNNCCNNTTTTTTTN
TTTTTTTTTCTTTTTCCTCCTCTCTTTTCTCCCTTCCCCCCCCCTCCCCC
CCTCCCCNTCCTTCCCTCTCCCCTTTTTTTTTTTTTTCTCCTCCCCCCCC
CCCCTTTTCTCCCTTCTTTTTTCCCCCCCTCCCCCCACCCTCTTTTTCCC
TTTTCACCCAACTTTTTTTTTGTGTCCCCCCCCCCGGGGGAAAAAATTTA
ATTTGCTGTACTTCCTATTTTTTGCGATACCGTCATACCTCTCTCTGACC
GTTTTTTTATCTCCCTCATATCTTTTATCCCTTTTCCCCCTTTACTCCCT
TTTCCCCCCCTTTATTCTCTCCTCATATCTCCCAGATCCCCTTTTACCCC
CTTTACCCCCACATAACCCCCTTTTATTTTTATGTTTTCATTCCTCTTCC
TATCCTTTCTTCCTCTTCTTATCTTACCTCCACCGCCTTCTCTTGTTATT
CTATCCTCCCCTCCCCATCCAACGACCATCTTCTCATTTTTTAATATATC
GCCATTACCCTCTCCGCACAATTCTCCGGGTTACAATACATCTTCCATTC
TCCTAGTG

Query= MSMg01no235_f05.b1 MSMg01no235_f05.b1 CHROMAT_FILE:
MSMg01no235_f05.b1 PHD_FILE: MSMg01no235_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:38 2005
         (675 letters)



>mm_chr14_16750966_16752040
          Length = 1075

 Score = 1253 bits (648), Expect = 0.0
 Identities = 665/671 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttaagtcacacatttccataacagagatacaatgtgtcagggcttcaacctg 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttaagtcagacatttccataacagagatacaatgtgtcagggcttcaacctg 264

                                                                       
Query: 65  ttcactgggagaagtgacttagctcctaaaaccatgcctaaaagctatcaagggtggtct 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcactgggagaagtgacttagctcctaaaaccatgcctaaaagctatcaagggtggtct 324

                                                                       
Query: 125 ggaaaaaatcaagagagcgccaggaacagctcaaataatcaggatagttcaagagacaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaaaaaatcaagagagcgccaggaacagctcaaataatcaggatagttcaagagacaaa 384

                                                                       
Query: 185 gaaccctgaggaaggctgcttatgaattctgagcaaaaagcaatgctggagctactacaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaccctgaggaaggctgcttatgaattctgagcaaaaagcaatgctggagctactacaa 444

                                                                       
Query: 245 tacccaatctcagattatatcacaaagccaaatgaaaactatgaagactatggatcttcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacccaatctcagattatatcacaaagccaaatgaaaactatgaagactatggatcttcc 504

                                                                       
Query: 305 acttaaacccagcagagggccccaaggtccccagaggactctccctgactcaggccctct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 acttaaacccagcagagggccccaaggtccccagaggactctccctgactcaggccctct 564

                                                                       
Query: 365 agcacgcccagcgcctcaggatcatgggtgagtggaacacaacatcagttcgaaacaatc 424
           ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 agcacgcccagggcctcaggatcatgggtgagtggaacacaacatcagttccaaacaatc 624

                                                                       
Query: 425 ccagagcatcttgtgccagcactaacagggacaaaggaacctggcttgactacaggctgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccagagcatcttgtgccagcactaacagggacaaaggaacctggcttgactacaggctgg 684

                                                                       
Query: 485 gattcattccagtaggggccagcctcgagccatcttcctcgcaaacctggcagagggccc 544
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gattcattccagtaggggccaacctcgagccatcttcctcgcaaacctggcagagggccc 744

                                                                       
Query: 545 caaggtccccaaaggactctccatgccacaggacccctagcacacccaggaccttgggat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caaggtccccaaaggactctccatgccacaggacccctagcacacccaggaccttgggat 804

                                                                       
Query: 605 ctcttgagagcacgtgagcagcagaagcaacagagctttttggacagggtcccttcaggn 664
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 805 ctcttgagagcacgtgagcagcagaagcaacagagcttcttggacagggtcccttcaggc 864

                      
Query: 665 cttcatcctca 675
           |||||||||||
Sbjct: 865 cttcatcctca 875


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)