TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTCACTAAAACCATCTGGCCCTAGGTTTCTTTTGTTTGGGAGACT
TTTTTTTTTTTCCTTAACTACTGAGCCATTCTCCAGCCCTGGTTGGGAGA
CGTTTAATGGCTGCTTTCATCTCCTTAGGGGTATTAGGTCTGTTTAAATT
ACTTATTTAATGCTTACTTGACTTTGAGAAATGGTTTGTGTTTTCCAATA
TGGTGGATTCCTGGGTTTTAAAATATGTTTAGATTCCCTAAGTGTTCTTA
TGTCCCCTTTTTCATTTCTGATTTTATTAATTTGGATTAACCAGTCTTTT
AGTAAATTTGAATAACACGCCGCCAGCCTTACTGATTTTTCTCAAGAACC
AACTCTTTTTTTCCATTGATTCTATTGTTTTTGTTGTTATGATTGTTGTT
TTTTCANTTCTGAATTTGATTACTTCTTGCCTTCTATTCCTTTTTTGGCT
GTGGTTTTTATTTTTGTTCTCACCATTATTAGTGCGATTTCTAATTGGTC
GCCGTGATTTTAGCCCTTGTTTTGAATGATCGCTTCTTCTGTTCTTCTCT
ATTTTGTGTTTTCCGAGTGTTCCTCCTTTATTTTTGTTTTTCCCCTTTTT
GTTATTATTTGGCCTTCCGCTTCCCCCCCACATCTTATTCCCTGTTATAT
TCACCGTTCACCAATTCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTCTGTGGGACTCACATGGCGGA
AGGAAAGCACCAACTCCTGAAAGCTGTCCTCTACACCTTTCTACATCCCC
CAATAAATAAATGTAGTAATAAAAAACCCAAAAACACAGGATTGGAGAGA
TGGCTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCA
ATTCCCAGCAACCACACGGTGGCTCACAACCATCTGCAATGGGATCTAAT
GCCCTCTTCTGGTGTGTCTGAAGACGGTGACAGTGTACTCGTCATATATA
TAAAATAATTAAATCTTAAAAAAAAAACAAAAAACCAACCCACACACAGT
GGGGGGTGGGGGCGGAGGTGTACATACCTTTAATCTCAGCACCCAGGAAG
TATTACACACAGAGGCAGGTTGATTCTGAGTTTGAGACCAGTGTGGATCA
CAGATAAAGTTCCAGGACAGCCAGGATTACACAGACATAGTGCTTCCTAT
GTTTAGCACATTTATCTTCCCTTTGTTTGACCCTGCCTCAAACAAACAAA
CAAACAAACAAGCAAACAAACCCAAACAACCCCCAACCCCTACCAAGACA
AAAAAAAAACTCAGAACACTTTATGATAGGCAATAGAAATACTCAATAAC
CCCCCCCAGACTCACGTCAG

Query= MSMg01no235_o08.g1 MSMg01no235_o08.g1 CHROMAT_FILE:
MSMg01no235_o08.g1 PHD_FILE: MSMg01no235_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:19 2005
         (644 letters)



>mm_chr14_71121369_71122412
          Length = 1044

 Score = 1149 bits (594), Expect = 0.0
 Identities = 630/648 (97%), Gaps = 14/648 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtctgtgggactcacatggcggaaggaaagcaccaactcctgaaagctgtcctctacac 60
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 agtctgtgggactcacatggcggaaggaaagcaccaactcctgaatgctgtcctctacac 260

                                                                       
Query: 61  ctttctacatcccccaataaataaatgtagtaataaaaaacccaaaaacacaggattgga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttctacatcccccaataaataaatgtagtaataaaaaacccaaaaacacaggattgga 320

                                                                       
Query: 121 gagatggctcagtggttaagagcactgactgctcttccagaggtcctgagttcaattccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatggctcagtggttaagagcactgactgctcttccagaggtcctgagttcaattccc 380

                                                                       
Query: 181 agcaaccacacggtggctcacaaccatctgcaatgggatctaatgccctcttctggtgtg 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 agcaaccacacggtggctcacaaccatctgcaatgggatctgatgccctcttctggtgtg 440

                                                                       
Query: 241 tctgaagacggtgacagtgtactcgtcatatatataaaataattaaatcttaaaaaaaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgaagacggtgacagtgtactcgtcatatatataaaataattaaatcttaaaaaaaaa 500

                                                                       
Query: 301 acaaaaaa-ccaacccacacacagtggggggtgggggcggaggtgtacatacctttaatc 359
           |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 acaaaaaaaccaacccacacacagtggggggtgggg-cggaggtgtacatacctttaatc 559

                                                                       
Query: 360 tcagcacccaggaagtattacacacagaggcaggttgattctgagtttgagaccagtgtg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcagcacccaggaagtattacacacagaggcaggttgattctgagtttgagaccagtgtg 619

                                                                       
Query: 420 gatcacagataaagttccaggacagccaggattacacagacatagtgcttcctatgttta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatcacagataaagttccaggacagccaggattacacagacatagtgcttcctatgttta 679

                                                                       
Query: 480 gcacatttatcttccctttgtttgaccctgcctcaaacaaacaaacaaacaaacaagcaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||        ||||
Sbjct: 680 gcacatttatcttccctttgtttgaccctgcctcaaacaaacaaacaa--------gcaa 731

                                                                       
Query: 540 acaaacccaaacaacccccaacccctaccaagacaaaaaaaaaactcagaacactttatg 599
           |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||
Sbjct: 732 acaaacccaaacaacccccaacccttaccaagacaaaaaaaaacc-cagaacactttatg 790

                                                           
Query: 600 ataggcaatagaaatactcaataacccccccc---agactcacgtcag 644
           ||||||||||||||||||||||||||||||||   |||||||||||||
Sbjct: 791 ataggcaatagaaatactcaataacccccccccccagactcacgtcag 838


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space:   655556
Effective search space used:   655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)