Query= MSMg01no236_j05.b1 MSMg01no236_j05.b1 CHROMAT_FILE:
MSMg01no236_j05.b1 PHD_FILE: MSMg01no236_j05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:10 2005
(674 letters)
>mm_chr14_75077515_75078589
Length = 1075
Score = 1205 bits (623), Expect = 0.0
Identities = 659/671 (98%), Gaps = 1/671 (0%)
Strand = Plus / Minus
Query: 5 gaattctacaaatgatatgcaaatttagatctatatctcttaatcgccaggctgaaaggg 64
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 875 gaattctacaaatgaaatgcaaatttagatctatatctcttaatcgccagactgaaaggg 816
Query: 65 ttgattacttaaaattagactttccagatgttctggttggaagcaggaatgggaggcaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 815 ttgattacttaaaattagactttccagatgttctggttggaagcaggaatgagaggcaga 756
Query: 125 ttaagataagaactggtcctttgaaaaagctctggttattttttaagagctgctgagacg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttaagataagaactggtcctttgaaaaagctctggttattttttaagagctgctgagacg 696
Query: 185 ctgaactgataaactgaaagcatccaggcttaggaggggaatgtagggggaaaccccaga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ctgaactgataaactgaaagcatccaggcttaggaggggaatgtagggggaaaccccaga 636
Query: 245 acaagatgggaggaaaagcaagctgaaatcctaccaatcaagtcagctcccagcatttct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 acaagatgggaggaaaagcaagctgaaatcctaccaatcaagtcagctcccagcatttct 576
Query: 305 ggaatctggaggcttgagtcaatggataaaagacatgctcttcttagttttgttcaaggg 364
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ggaatctggaggcttgagtcgatggataaaagacatgctcttcttagttttgttcaaggg 516
Query: 365 tactcacaggttagcctcgttgagcttgtcaaaaactcccttcagaagtgttaaattttc 424
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tactcacaggttagcctcattgagcttgtcaaaaactcccttcagaagtgttaaattttc 456
Query: 425 atcacctttaaatatttgatttgcagaaaacaacctgctctttccttttcctgggcagaa 484
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 455 atcacctttaaatatttgatttgcagaaaacaacccgctctttccttttcctgggcagaa 396
Query: 485 ccagc-aatgtgcaccggagtttcctttcctccgtgttaacctgtgggacactggaaagg 543
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ccagcaaatgtgcaccggagtttcctttcctccgtgttaacctgtgggacactggaaagg 336
Query: 544 cctgttctagctcagatgttcccaaaaccttgctagaattttgtaccacacacgtatttc 603
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 335 cctgttctagctcagatgttcccaaaaccttgctaaaattttgcaccacacacgtatttc 276
Query: 604 ttcaggcccacagagacttttggcctttctgccttctctgttgaaaacacacaagggtcc 663
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 275 ttcaggcccacagagacttttggcctttctgccttctctgttgaaagcacacaagcatcc 216
Query: 664 ggaggagacag 674
|||||||||||
Sbjct: 215 ggaggagacag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space: 707160
Effective search space used: 707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_j05.g1 MSMg01no236_j05.g1 CHROMAT_FILE:
MSMg01no236_j05.g1 PHD_FILE: MSMg01no236_j05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:10 2005
(338 letters)
>mm_chr14_75000701_75001438
Length = 738
Score = 607 bits (314), Expect = e-178
Identities = 332/338 (98%)
Strand = Plus / Plus
Query: 1 tggacggagactcagtagatgttgcacaaacctcccttaaacagtcccctttcctcctcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggacggagactcagtagatgttgcacaaacctcccttaaacagtcccctttcctcctcg 260
Query: 61 tatcctgaaaggtatatgttaagacacagtcatttgtccaggagcccaatggttcagtgt 120
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 tctcctgaaaggtatatgttaagacacagtcatttgtccgggagcccaatggttcagtgt 320
Query: 121 ccaggagaacagctgaacttctttggataaatcaaggattgtacaaagatgagggacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggagaacagctgaacttctttggataaatcaaggattgtacaaagatgagggacagg 380
Query: 181 gtgggtggatgagaaagacagagaacagagttctacaggaaacttcggttagctggggcc 240
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 gtgggtggatgagaaagacagagaacagagttctacaggaaacttttgttagctggggcc 440
Query: 241 atgctggatatgatgtggttctctctttcagttctctctcccctaaaatatatacccgca 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgctgaatatgatgtggttctctctttcagttctctctcccctaaaatatatacccgca 500
Query: 301 ggaaacatgggattaagggttattctgaaggctggggg 338
||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 ggaaacatgggattaagggttattctggaggctggggg 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
