Query= MSMg01no262_i01.b1 MSMg01no262_i01.b1 CHROMAT_FILE:
MSMg01no262_i01.b1 PHD_FILE: MSMg01no262_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:10 2005
(500 letters)
>mm_chr14_110605776_110606675
Length = 900
Score = 826 bits (427), Expect = 0.0
Identities = 481/517 (93%), Gaps = 29/517 (5%)
Strand = Plus / Plus
Query: 13 gaattcagtgaagagg-aacccatttttaaagtctttatcgatgcagtagttactgtgct 71
|||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||
Sbjct: 184 gaattcagtgaagaggaaaatcatttttaaagtctttattgatgcagtagttactgtgct 243
Query: 72 gttataaaatagcatgctattagttcttagagtctatttatcattaaaggtcataatact 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gttataaaatagcatgctattagttcttagagtctatttatcattaaaggtcataatact 303
Query: 132 ggtgtcatgctacttctagtacactatagagaagaatatcatt----------------- 174
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 304 ggtgtcatgctacttctagtacgctatagagaagaatatcatttatatatatatatatat 363
Query: 175 -----------tatatatatatatatatacatataatatgtcactggaaatattaagctg 223
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 364 atatatatatatatatatatatatatatatatataatatgtcactggaaatattaagctg 423
Query: 224 tcttatcatgctaatcatgtaatataatcatgccagctctattactctaatgcattttgc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tcttatcatgctaatcatgtaatataatcatgccagctctattactctaatgcattttgc 483
Query: 284 tatattaagtatgacagaacataatttacctggatagttaataggtatttctataaattt 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 tatattaagtatgacagaacataatttacctggatagttaataggtatttctataaattt 543
Query: 344 gtttaagagtggacattttatagattatatattggttgcattcattccaaatttaattct 403
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 544 gtttaagagtggacattttatagattatatattggttgcgttcattccaaatttaattct 603
Query: 404 aaatattatggttacgatttttgtgtttatattgcaaaaatttcattatcaaaggaaata 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaatattatggttacgatttttgtgtttatattgcaaaaatttcattatcaaaggaaata 663
Query: 464 ctataaaacaagatataaatgtataaacattaaccaa 500
||||||| |||||||||||||||||||||||||||||
Sbjct: 664 ctataaagcaagatataaatgtataaacattaaccaa 700
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_i01.g1 MSMg01no262_i01.g1 CHROMAT_FILE:
MSMg01no262_i01.g1 PHD_FILE: MSMg01no262_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:10 2005
(338 letters)
>mm_chr14_110729596_110730333
Length = 738
Score = 615 bits (318), Expect = e-180
Identities = 333/338 (98%)
Strand = Plus / Minus
Query: 1 ttctgcaggtctggggcttccctcgttggaaatatggtagaaaagcaagaaagctcagtg 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 538 ttctgcaggtctggggcttccctccttggaaatatggtagaaaagcaagaaagctcagtg 479
Query: 61 cagaaggtcagggaggttcagatgtctgtgactactcacagcaatttattccagaatgtt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 478 cagaaggtcagggaggttcagatgtctgtgactactcacagtaatttattccagaatgtt 419
Query: 121 tgaagttaccagaattagttccatattcatgttttaatgtatttgctcataactggaaaa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 418 tgaagttaccagaattagttccatatccatgttttaatgtatttgctcataactggaaaa 359
Query: 181 tattttgatggtgtttctcagaaacaggattagctatcaaattcttttattatctataga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 358 tattttgatggtgtttctcagaaacaggattagctatcaaattcttttattacctataga 299
Query: 241 atatgatcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 atatgatcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgca 239
Query: 301 tgggggagtggatcctcacaggagttttgtatttgtga 338
|||||||||||||||||| |||||||||||||||||||
Sbjct: 238 tgggggagtggatcctcaaaggagttttgtatttgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
