Query= MSMg01no263_j12.b1 MSMg01no263_j12.b1 CHROMAT_FILE:
MSMg01no263_j12.b1 PHD_FILE: MSMg01no263_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:33 2005
(369 letters)
>mm_chr14_106321001_106321769
Length = 769
Score = 665 bits (344), Expect = 0.0
Identities = 359/364 (98%)
Strand = Plus / Plus
Query: 5 gaattctcttctgtgacgattagtgtgtttctttgttttataaatagctagtattgagaa 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttctgtaatgattagtgtgtttctttgttttataaatagctagtattgagaa 264
Query: 65 aaggatccatttttactgaaaaccataatagaagttattctaaaaatttttaaaaatatg 124
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaggatccatttttaatgagaaccataatagaagttattctaaaaatttttaaaaatatg 324
Query: 125 acaagatattttctaataaatcatagaatgccttcctagaaattagggttttcatatctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaagatattttctaataaatcatagaatgccttcctagaaattagggttttcatatctt 384
Query: 185 gtatacaataagagttaagaaagaaacatactttagggcctctgatttttacatactata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtatacaataagagttaagaaagaaacatactttagggcctctgatttttacatactata 444
Query: 245 tatatttcaaatcatttaaacataagcagctcatcttaaaattaattctaaggttattaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatatttcaaatcatttaaacataagcagctcatcttaaaattaattctaaggttattaa 504
Query: 305 tatcccattgtactacataccttgattactatcattgtttagaagtatcgtttgtcatga 364
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatcccattgtacaacataccttgattactatcattgtttagaagtatcgtttgtcatga 564
Query: 365 ttca 368
||||
Sbjct: 565 ttca 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_j12.g1 MSMg01no263_j12.g1 CHROMAT_FILE:
MSMg01no263_j12.g1 PHD_FILE: MSMg01no263_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:33 2005
(523 letters)
>mm_chr14_106484652_106485574
Length = 923
Score = 936 bits (484), Expect = 0.0
Identities = 514/524 (98%), Gaps = 2/524 (0%)
Strand = Plus / Minus
Query: 1 tggagatgagttctacagaaacacttcgagaggcgtttgtctgttcttcgcgcggcaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 723 tggagatgagttctacagaaacacttcgagaggcgtttgtctgttcttcgtgcggcaatg 664
Query: 61 acgcaagggtctttagaacatgagaacacacaaat-agggtaaaatttctagatatttcc 119
||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 663 acgcaagggtcttcagaacatgagaacacac-aatgagggtaaaatttctagatatttcc 605
Query: 120 tgacaaataattgtagggttttctttctctttgactgtctggagacgaaaatcagaggag 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tgacaaataattgtaggattttctttctctttgactgtctggagacgaaaatcagaggag 545
Query: 180 ccactttgggcgtggtttgtcctcaagaggtttatgtgcttcaagtttggactttggttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 ccactttgggcgtggtttgtcctcaagaggtttatgtgcttcaagtttggactttggttt 485
Query: 240 gccagtgttcacatagtagaacctttaaaaaattatatagggcctttgtggaaaagaaca 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 484 gccagtgttcacatagtagaaccttttaaaaattatatagggcctttgtggaaaagaaca 425
Query: 300 tgactgagtcatctgggtgctaccctcatggatacttgcatgctgcgcctcaagcccact 359
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 424 tgactgagtcatctgggtgctaccctcatggatacttgcatgctgtgtctcaagcccact 365
Query: 360 aagaagggtaccagttttctcaagagaaggttcttataaaaagaggaagcctctgcacac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagaagggtaccagttttctcaagagaaggttcttataaaaagaggaagcctctgcacac 305
Query: 420 tccattcttttgcaacttttttcatggtgtgaacaatctctctaacatgggctcccaccg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 304 tccattcttttgcaacttttttcatggtgtgaacaatctctctaacatgggctcccactg 245
Query: 480 aaatgtcatcttgaccataatgtaatgtagccagaaagccttca 523
| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atatgtcatcttgaccataatgtaatgtagccagaaagccttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
