Query= MSMg01no263_p17.b1 MSMg01no263_p17.b1 CHROMAT_FILE:
MSMg01no263_p17.b1 PHD_FILE: MSMg01no263_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:03 2005
(651 letters)
>mm_chr14_75751781_75752831
Length = 1051
Score = 1195 bits (618), Expect = 0.0
Identities = 628/634 (99%), Gaps = 5/634 (0%)
Strand = Plus / Minus
Query: 5 gaattctcattgtctgtgaacaatcagattcaaggttggacccacttaggattgtcatta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaattctcattgtctgtgaacaatcagattcaaggttggacccacttaggattgtcatta 570
Query: 65 gcacaatatgaagattaattaggcaataatctttttaccagctgcccaggggtggctaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcacaatatgaagattaattaggcaataatctttttaccagctgcccaggggtggctaac 510
Query: 125 aggtttggtagcttaagctacatctttttaacttactctgtatctgtgatggggaacatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 aggtttggtagcttaagctacatctttttaacttactctgtatctgtgatggggaacatt 450
Query: 185 tctaggcagttagttgacagtggcaacaattttgacaaagcttattattactgcttcaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tctaggcagttagttgacagtggcaacaattttgacaaagcttattattactgcttcaaa 390
Query: 245 tggctctccatccattgtgacatacggatacttatgaaattcttcataagtactgcacag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tggctctccatccattgtgacatacggatacttatgaaattcttcataagtactgcacag 330
Query: 305 gaggcggcagtatctggctccttcattctctgtcacataggctagcccagacaaatcaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gaggcggcagtatctggctccttcattctctgtcacataggctagcccagacaaatcaca 270
Query: 365 tgatgtaacacccccactacccaactgaaaagacagaaaagccacatgttttcctttgtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgatgtaacacccccactacccaactgaaaagacagaaaagccacatgttttcctttgtt 210
Query: 425 ttagagctgcaaccctttaatacagttccgcatgctgtggtgacccccaaccaaaattat 484
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 209 ttagagctgcaaccctttaatacagtt-----tgctgtggtgacccccaaccaaaattat 155
Query: 485 tatggtttatgattattttcattgctacttcctaactgtaattttgctactgttatgaat 544
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 154 tatggtttatgattattttcattgctacttcctaactgtaattttgttactgttatgaat 95
Query: 545 cataatgtaagtatgtgtcttcctatggtctttggaggtcgtgatccacaagttgagaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 cataatgtaagtatgtgtcttcctatggtctttggaggtcgtgatccacaagttgagaaa 35
Query: 605 cactgttttagaggctttctcttgaggctctctt 638
||||||||||||||||||||||||||||||||||
Sbjct: 34 cactgttttagaggctttctcttgaggctctctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_p17.g1 MSMg01no263_p17.g1 CHROMAT_FILE:
MSMg01no263_p17.g1 PHD_FILE: MSMg01no263_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:03 2005
(614 letters)
>mm_chr14_75685971_75686986
Length = 1016
Score = 1164 bits (602), Expect = 0.0
Identities = 612/616 (99%), Gaps = 2/616 (0%)
Strand = Plus / Plus
Query: 1 acaattagcatattttttattaacaaaatttaagaggccttgaaagtacttacttattca 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acaattagcatattttttattaacaaaatttaagaggccttgaaagtaattacttattca 260
Query: 61 agaagagccacctctgccatgctcctttctcagccaggttgatggtatggaactcagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaagagccacctctgccatgctcctttctcagccaggttgatggtatggaactcagagt 320
Query: 121 atattgttccctgaagaaggggagcagttctcatatttgagatgtattttctcttaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atattgttccctgaagaaggggagcagttctcatatttgagatgtattttctcttaatag 380
Query: 181 gctcagtattattgtccctgaatttgaattttcttcctattttttt--aattgaaaggag 238
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 381 gctcagtattattgtccctgaatttgaattttcttcctttttttttttaattgaaaggag 440
Query: 239 atgatgaaagttccaaatatttattacactccagaggagactagataaaggaaaacaact 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgatgaaagttccaaatatttattacactccagaggagactagataaaggaaaacaact 500
Query: 299 gcatagtcatttggttttgataactcttgtatttgagaaagatggaagaaataggtggtg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatagtcatttggttttgataactcttgtatttgagaaagatggaagaaataggtggtg 560
Query: 359 atagccttaaccaaagaataatttgaataccaaatggaggaacatcttcaggcaagagtc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atagccttaaccaaagaataatttgaataccaaatggaggaacatcttcaggcaagagtc 620
Query: 419 agtttaataataagtggttggtttacagtctctgattggaaagacattggcatctacaat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agtttaataataagtggttggtttacagtctctgattggaaagacattggcatctacaat 680
Query: 479 tctggttctttatgtctgatagttctcttccactttgaaatactcatatctgtctcatta 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctggttctttatgtctgatagttctcttccactttgaaatactcatatctgtctcatta 740
Query: 539 atggtttttgacttttaatcaaatttaaattctactcttttgtagtattcatctttcttt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atggtttttgacttttaatcaaatttaaattctactcttttgtagtattcatctttcttt 800
Query: 599 gtgaacccagcattta 614
||||||||||||||||
Sbjct: 801 gtgaacccagcattta 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1016
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1006
Effective search space: 607624
Effective search space used: 607624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
