Query= MSMg01no264_a18.b1 MSMg01no264_a18.b1 CHROMAT_FILE:
MSMg01no264_a18.b1 PHD_FILE: MSMg01no264_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:08 2005
(184 letters)
>mm_chr14_8597096_8597679
Length = 584
Score = 350 bits (181), Expect = e-101
Identities = 183/184 (99%)
Strand = Plus / Plus
Query: 1 agtcatctgaggctgcttcacacggcagagtcccatcttccaggccttccacaccgttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcatctgaggctgcttcacacggcagagtcccatcttccaggccttccacaccgttga 260
Query: 61 tttgcttcttggcctgtaaaataaacaccaccaagtagtcccaaaatgtttacaccatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgcttcttggcctgtaaaataaacaccaccaagtagtcccaaaatgtttacaccatat 320
Query: 121 atgactagtgtggatgtgataatattttatcttanaagatactgggctggagagatggct 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 atgactagtgtggatgtgataatattttatcttaaaagatactgggctggagagatggct 380
Query: 181 cagt 184
||||
Sbjct: 381 cagt 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_a18.g1 MSMg01no264_a18.g1 CHROMAT_FILE:
MSMg01no264_a18.g1 PHD_FILE: MSMg01no264_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:08 2005
(287 letters)
>mm_chr14_8777835_8778519
Length = 685
Score = 474 bits (245), Expect = e-138
Identities = 276/287 (96%), Gaps = 2/287 (0%)
Strand = Plus / Minus
Query: 1 tgattggatacctgggagagaagaagtgtgatatacatggatggttctcgggagggacac 60
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 485 tgattggatacctgggagagaagaagtgtgatat--atggatggttttcgggagggacac 428
Query: 61 agcggtgagacacacttttgcccacattaagtgcttgctgtggtagatgggaaccaactg 120
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 427 agcggtgagacacacttttgcccacattaagtgcttgttgtggtagataggaaccaactg 368
Query: 121 gctctacatctgagttcccggcacagagaagaagcacagggcatgggggtgcagctccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gctctacatctgagttcccggcacagagaagaagcacagggcatgggggtgcagctccct 308
Query: 181 tgtcgaggctaggttgggagggtggctgacatttcgcccactgagtgcctgagcaaggct 240
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgttgaggctaggttgagagggtggctgacatttcgcccactgagtgcctgagcaaggct 248
Query: 241 attgtctcttttaatgtggctgagggtgagtagtcactgtgagtctg 287
||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 247 attgtctctgggaatgtggctgagggtgagttgtcactgtgagtctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 685
Length adjustment: 9
Effective length of query: 278
Effective length of database: 676
Effective search space: 187928
Effective search space used: 187928
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
