Query= MSMg01no266_b03.b1 MSMg01no266_b03.b1 CHROMAT_FILE:
MSMg01no266_b03.b1 PHD_FILE: MSMg01no266_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:45 2005
(321 letters)
>mm_chr14_25420514_25421233
Length = 720
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgtcctgacttcagttgagccaggaagcatctggatttggtgacatgttgtt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaattcagtgtcctgacttcagttgagccaggaagcatctggatttggtgacatgttgtt 461
Query: 65 agatatccccgttcacctgaaggaactagccttaccgatttgtagataaaggcatggagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agatatccccgttcacctgaaggaactagccttaccgatttgtagataaaggcatggagg 401
Query: 125 ctgcttggtgcagcgatgcgatttagccagggtcagaggaagaaaaatcagtaaggttaa 184
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 400 ctgcttggtgcagcgatgcgatttagccagggtcagaggaagaataatcagtaaggttaa 341
Query: 185 acatcactgagtctttccagtcatgttcaattattttttttaatgtttatgttacctaaa 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 340 acatcactgagtctttccagtcatgttcaatta-tttttttaatgtttatgttacctaaa 282
Query: 245 tataattgtgggtttcatcatgacattttcacacatacatgatgtctttgatcataactg 304
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tgtaattatgggtttcatcatgacattttcacacatacatgatgtctttgatcataactg 222
Query: 305 ccaccaccgcatgctct 321
|||||||||||||||||
Sbjct: 221 ccaccaccgcatgctct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 720
Length adjustment: 9
Effective length of query: 312
Effective length of database: 711
Effective search space: 221832
Effective search space used: 221832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_b03.g1 MSMg01no266_b03.g1 CHROMAT_FILE:
MSMg01no266_b03.g1 PHD_FILE: MSMg01no266_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:45 2005
(292 letters)
>mm_chr14_25214526_25215217
Length = 692
Score = 536 bits (277), Expect = e-157
Identities = 286/289 (98%)
Strand = Plus / Minus
Query: 1 ctagatcacactgggaaggcttatgtctatgagattggaaatctgagccaatcttagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctagatcacactgggaaggcttatgtctatgagattggaaatctgagccaatcttagtta 430
Query: 61 atggcctggactctttgttatgactacagaaatagcatttgaaaacggagaaaacgggca 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 429 atggcctggactctttgttatgactacagaaatagcatttgaaaacagagaaaacaggca 370
Query: 121 ttttcccatcactgattcttataaagtccagccttgtggatgtagagagaacacagtcct 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttttcccatcactgattcttatagagtccagccttgtggatgtagagagaacacagtcct 310
Query: 181 aaattacaaatatcagttcttgatagggtcttactatgtcaaatagctttaccttaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaattacaaatatcagttcttgatagggtcttactatgtcaaatagctttaccttaatct 250
Query: 241 taggccatacttcttcctccatgaacagaggctaataaatacagccctc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 taggccatacttcttcctccatgaacagaggctaataaatacagccctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
