Query= MSMg01no266_e01.b1 MSMg01no266_e01.b1 CHROMAT_FILE:
MSMg01no266_e01.b1 PHD_FILE: MSMg01no266_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:00 2005
(669 letters)
>mm_chr14_85837337_85838403
Length = 1067
Score = 1210 bits (626), Expect = 0.0
Identities = 655/666 (98%), Gaps = 4/666 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatttcagtctataacatttgaaattaaatacctttaccatatttatttttctg 64
||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||
Sbjct: 867 gaattcaatttcagtatataacgtttgaaattaaatacatttaccatatttatttttctg 808
Query: 65 ataattcaaaggtttgtaaagtatcgttcccctctggcaaatccttttattgacattgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ataattcaaaggtttgtaaagtatcgttcccctctggcaaatccttttattgacattgtt 748
Query: 125 tatacaccagtttctatattgtagaattctgttagaaatgcacatttaaatttgtgtttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tatacaccagtttctatattgtagaattctgttagaaatgcacatttaaatttgtgtttt 688
Query: 185 agtcaaatgtgtgtttctgctattgaaataatagcagatgtggattactcaatcattctt 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 agtcagatgtgtgtttctgctattgaaataatagcagatgtggattactcaatcattctt 628
Query: 245 tagagtaagtgactttcttggaatggttcctgaatatgagaggaagatgtcttagtttat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tagagtaagtgactttcttggaatggttcctgaatatgagaggaagatgtcttagtttat 568
Query: 305 tgtgttttccaaccaaaagttgaaatattaaaatgatatttaatttacttttaacaactt 364
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 567 tgtgttttccaaccaaaagttgaaattttaaaatgatatttaatttacttttaacaaatt 508
Query: 365 tatatataagtactatattccataattttcctgctatctcctctctccaaatcctccctt 424
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 507 tatatataagtactatattccataattttc---ctatctcctctctccaaatcctccctt 451
Query: 425 atactaaccacacatttctcttatccattacatacatatgtatgaacataatgatatata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atactaaccacacatttctcttatccattacatacatatgtatgaacataatgatatata 391
Query: 485 tcataaagtgtatcat-aataatatatcataaataaaaatcatatgatatgtatatcata 543
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcataaagtgtatcataaataatatatcataaataaaaatcatatgatatgtatatcata 331
Query: 544 aattaaattggaaaaatttgtttctttctttccatatgcatatgctttcaagaataactg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 aattaaattggaaaaatttgtttctttctttccatatgcatatgctttcaagaataactg 271
Query: 604 gagctgtataacatttcaggaggcacagttctagagaaggctgattaggcatttctcagc 663
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 270 gagctgtataacatttcaggaggcacagttctagagaaggctgattagacatttctcagc 211
Query: 664 aacaat 669
||||||
Sbjct: 210 aacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1067
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1057
Effective search space: 696563
Effective search space used: 696563
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_e01.g1 MSMg01no266_e01.g1 CHROMAT_FILE:
MSMg01no266_e01.g1 PHD_FILE: MSMg01no266_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:00 2005
(284 letters)
>mm_chr14_85689336_85690020
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 279/281 (99%), Gaps = 1/281 (0%)
Strand = Plus / Plus
Query: 1 gagtcagagatgcacccactcctgcctgaatgctattttaaataccacctacattcctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagtcagagatgcacccactcctgcctgaatgctattttaaataccacctacattcctca 260
Query: 61 acataatttctccaaaatacgtctaatagctgctccctacataatatacagaaa-gcgag 119
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 261 acataatttctccaaaatacgtccaatagctgctccctacataatatacagaaaagcgag 320
Query: 120 aagttaaattctgatttataaaactgagcaaaatatagtttgaaacacttatgaaaatac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagttaaattctgatttataaaactgagcaaaatatagtttgaaacacttatgaaaatac 380
Query: 180 ctttcttacatattgctttctaaatgaaaaatgctatttcagatcaaatagttgctatct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttcttacatattgctttctaaatgaaaaatgctatttcagatcaaatagttgctatct 440
Query: 240 caaactcttgtattcagtggttcttagacatatgctcagat 280
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaactcttgtattcagtggttcttagacatatgctcagat 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
