Query= MSMg01no266_l10.b1 MSMg01no266_l10.b1 CHROMAT_FILE:
MSMg01no266_l10.b1 PHD_FILE: MSMg01no266_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:34 2005
(317 letters)
>mm_chr14_25586598_25587313
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%), Gaps = 1/313 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaaactttttgtaaagggatttttactgcagtttatttctggggccaaaggcg 64
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 205 gaattcacaaactttttgtaaagggattttt-ctgtagtttatttctggggccaaaggcg 263
Query: 65 ttcactttgtggaatgtaagcaactgagaatcatgtactgtgaccttgatttgtcattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcactttgtggaatgtaagcaactgagaatcatgtactgtgaccttgatttgtcattaa 323
Query: 125 aacatttatcaatggggattggtgttggggactcacattatcatgataaaggttttgtgc 184
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 324 aacatttatcaatggggattggtgttggagactcacattatcatgataaaggttttgtgc 383
Query: 185 gtgtgtgaaccctcgagagtgcgcacatgtaagtcgtggtggtgcagtggggtaagaggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtgtgaaccctcgagagtgcgcacatgtaagtcgtggtggtgcagtggggtaagaggt 443
Query: 245 caagctcaggtatggttctaccttgtttttgagacaaggtctctcactgttctagaactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 caagctcaggtatggttctaccttgtttttgagacaaggtctctcactgttgtagaactt 503
Query: 305 gctaattcagtga 317
|||||||||||||
Sbjct: 504 gctaattcagtga 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_l10.g1 MSMg01no266_l10.g1 CHROMAT_FILE:
MSMg01no266_l10.g1 PHD_FILE: MSMg01no266_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:34 2005
(286 letters)
>mm_chr14_25698571_25699256
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 283/286 (98%)
Strand = Plus / Minus
Query: 1 tcactaatagaccacagtaccagtgtgggctagaactctcttgtacctgcttacaaagtt 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 486 tcactaatagaccacagtaccagtgtgggctagaactctctcgtacctgcttacaaagtt 427
Query: 61 ctgcactgtgtttggtagccatgtgttgaatttggccatagagaaagtgaggtgaaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctgcactgtgtttggtagccatgtgttgaatttggccatagagaaagtgaggtgaaggcc 367
Query: 121 attcttaaggcctcttataagggtcctgtgtgccttcacctgggaccgggaggtgggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 attcttaaggcctcttataagggtcctgtgtgccttcacctgggaccgggaggtgggaga 307
Query: 181 cataaagatcttcaggtgggctgtttggtgactctcagggatttggagtgtggcagaacc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 306 cataaagatcttcaggtgggctgtttggtgactctcagggacttggagtgtggcagaacc 247
Query: 241 cagggcaaccctctagattatacatagacagacactgaggactagt 286
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 246 cagggcaaccctctagattatatatagacagacactgaggactagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
