Query= MSMg01no270_g04.b1 MSMg01no270_g04.b1 CHROMAT_FILE:
MSMg01no270_g04.b1 PHD_FILE: MSMg01no270_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:01 2005
(319 letters)
>mm_chr14_77144752_77145471
Length = 720
Score = 557 bits (288), Expect = e-163
Identities = 300/304 (98%), Gaps = 1/304 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccatgaaaatgt-aaaagcaacattgaacccttaagtgcaggctgcaagtgct 62
||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||||||
Sbjct: 204 ggaattcccatgaaaatgtaaaaagcaacgttgaacccttaagtgcaggccgcaagtgct 263
Query: 63 tttgtgtacacagtctgagctgctcgtgcttccgtttgctgctctgtgggaccgtgtaaa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgtgtacacagtctgagctgctcgtgcttccgtttgctgctctgtgggaccgtgtaaa 323
Query: 123 taccggaggaaagaggtgcttgctgttctccctgggctccctgggacgactgtgtcacga 182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 324 taccggaggaaagaggtgcttgctgttctctctgggctccctgggacgactgtgtcacga 383
Query: 183 agcagcgttagccgaggttccttctcccaacattcagtaagcctccctgctattcagcgg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcagcgttagccgaggttccttctcccaacattcagtaagcctccctgctattcagcgg 443
Query: 243 gagactcgttttcagtgtgaaagattgcgctgctcacagataaaccgttgtaaggccctg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagactcgttttcagtgtgaaagattgcgctgctcacagataaaccgttgtaaggccctg 503
Query: 303 actt 306
||||
Sbjct: 504 actt 507
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no270_g04.g1 MSMg01no270_g04.g1 CHROMAT_FILE:
MSMg01no270_g04.g1 PHD_FILE: MSMg01no270_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:01 2005
(238 letters)
>mm_chr14_77311962_77312599
Length = 638
Score = 379 bits (196), Expect = e-110
Identities = 220/238 (92%), Gaps = 16/238 (6%)
Strand = Plus / Minus
Query: 1 ttttgatgatgggtcattaattcattgtgttgtgctatgccctgtcacatgtaacaggat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 351 ttttgatgatgggtcattaattcattgtgttgtgctatgccctgtcatatgtaacaggat 292
Query: 61 gcctcatggtggcaaaatgtgggggaatagaaccagtcgaagggagaggcctctgtatta 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 291 gcctcatggtggcaaaatgtgggggaatagaaccagtcgcagggagaggcctctgtatta 232
Query: 121 gagccacagatactcacgaaaagatttaatcgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 180
||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 231 gagccacagatactcacgaaaagatttaatc----------------gtgtgtgtgtgtg 188
Query: 181 tgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagagag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagagagagagag 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 26
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
