Query= MSMg01no274_m05.b1 MSMg01no274_m05.b1 CHROMAT_FILE:
MSMg01no274_m05.b1 PHD_FILE: MSMg01no274_m05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:22 2005
(233 letters)
>mm_chr14_25086784_25087416
Length = 633
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 gttcatctggagtccactgttcaaaatgagtaccgtggttccaaaatggaatcacatcgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcatctggagtccactgttcaaaatgagtaccgtggttccaaaatggaatcacatcgc 260
Query: 61 catccatgaggcaggtaagggaagaagcttggctctcctctctcaccgagaaagcagcag 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattcatgaggcaggtaagggaagaagcttggctctcctctctcaccgagaaagcagcag 320
Query: 121 ctgggatctgaggcctcacaatgattgtggaagccaaggctgcaaaggtctccaaccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgggatctgaggcctcacaatgattgtggaagccaaggctgcaaaggtctccaaccaac 380
Query: 181 cagttggcagcttccattcagggttggactctcctgacaggccttgctcagag 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagttggcagcttccattcagggttggactctcctgacaggccttgctcagag 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no274_m05.g1 MSMg01no274_m05.g1 CHROMAT_FILE:
MSMg01no274_m05.g1 PHD_FILE: MSMg01no274_m05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:14:22 2005
(635 letters)
>mm_chr14_25259750_25260788
Length = 1039
Score = 1004 bits (519), Expect = 0.0
Identities = 609/641 (95%), Gaps = 8/641 (1%)
Strand = Plus / Minus
Query: 1 acagaaatctgc---cttttctctcccaactcctgaaattttccacctcc-tcctcaggc 56
|||||||||||| ||||||||||||||||||||||| |||||||| || | |||||||
Sbjct: 839 acagaaatctgccttcttttctctcccaactcctgaaa-tttccacccccat-ctcaggc 782
Query: 57 agaaattacagtttgtttaggaacatcccttgtagagaacagatttcactccttttatgg 116
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 781 agaaattacagtttgtttaggaacatcccttgtagagaacagattccactccttttatgg 722
Query: 117 tgctctcgacattgattaccgatttctgtgaaaagggctctgtagataacaataggttaa 176
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgctctcaacattgattaccaatttctgtgaaaagggctctgtagataacaataggttaa 662
Query: 177 agagtttccaagatgagcccatgcagatgcctctgctgtggggttgcctagacccatcac 236
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 661 agagtttccaagatgagcccatgcagatgcctctgctgtggggttgtctagatccatcac 602
Query: 237 aggagtgttctacaacagactcccagagagagccaggatacagtttcccatctctcgtcc 296
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtagtgttctacaactgactcccagagagagccaggatacagtttcccatctctcgtcc 542
Query: 297 tgaggaacttgagctttctgtttggttccagagactatgtcgggccgttgttctcagaga 356
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 541 tgaggaacttgagctttctgtttgtttccagagactatgtcaggccgttgttctcagaga 482
Query: 357 caccactggagaattgctgctcctgcctcacaggctctattgtgtgtgttacttgagtac 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 caccactggagaattgctgctcctgcctcacaggctctattgtgtgtgttacttgagtgc 422
Query: 417 atggtgccttctgtgcaggaggactgagctattcttatgcccttgttcaggtaccagtga 476
||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||
Sbjct: 421 atgatgccttctgtgcaggaggactgagctattctcatgccctcgttcaggtaccaatga 362
Query: 477 tgtaagactgt--ctgtatagaatgctatgatccatcactaactcaccatgaataagtag 534
||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||| | |
Sbjct: 361 tgtaagactgtgtctgtatataatgctgtgatccatcactaactcaccatcaataacttg 302
Query: 535 catattgctcatctgttgttgattatgggtcgctacctttacaaaatgattctcatggac 594
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatcgctcatatgttgttgattatgggtcgctacctttacaaaatgattctcatggac 242
Query: 595 tccaagagaaagtcctatattttctaatagaaagagaacat 635
|||||| ||||||||||||||||||||||||||||||||||
Sbjct: 241 tccaagcgaaagtcctatattttctaatagaaagagaacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1039
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1029
Effective search space: 643125
Effective search space used: 643125
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
