Query= MSMg01no277_h23.b1 MSMg01no277_h23.b1 CHROMAT_FILE:
MSMg01no277_h23.b1 PHD_FILE: MSMg01no277_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:38 2005
(273 letters)
>mm_chr14_23924815_23925486
Length = 672
Score = 513 bits (265), Expect = e-150
Identities = 271/273 (99%), Gaps = 1/273 (0%)
Strand = Plus / Minus
Query: 1 caactggaaggaaaaggggggagaaaaaaaatacatacacgctcaaagatgtcattgtca 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 472 caactggaaggaaaaggggggag-aaaaaaatacatacacgctcaaagatgtcattgtca 414
Query: 61 acttccagaactttctccaccaaagtacactgaagggcttctgactaagggagtacatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 acttccagaactttctccaccaaagtacactgaagggcttctgactaagggagtacatcc 354
Query: 121 aatggggacctgagcatctcacaccttaggatgctggtgtcactctgttttgtgagatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aatggggacctgagcatctcacaccttaggatgctggtgtcactctgttttgtgagatag 294
Query: 181 tttggaattgcaatgctgcggttggagatgcttctgcctgggttcacactctaaggagat 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tttggaactgcaatgctgcggttggagatgcttctgcctgggttcacactctaaggagat 234
Query: 241 gattataagccagagaagcaactttagggtaat 273
|||||||||||||||||||||||||||||||||
Sbjct: 233 gattataagccagagaagcaactttagggtaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 672
Length adjustment: 9
Effective length of query: 264
Effective length of database: 663
Effective search space: 175032
Effective search space used: 175032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no277_h23.g1 MSMg01no277_h23.g1 CHROMAT_FILE:
MSMg01no277_h23.g1 PHD_FILE: MSMg01no277_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:39 2005
(270 letters)
>mm_chr14_23742574_23743243
Length = 670
Score = 522 bits (270), Expect = e-153
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 aacctgttgcccttttcataggatatttaggagataggcagattatatttgtaaaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacctgttgcccttttcataggatatttaggagataggcagattatatttgtaaaagtta 260
Query: 61 tttgtaagcagtaaatgattaagcactgtttatggcctgtggagaatacagaacctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgtaagcagtaaatgattaagcactgtttatggcctgtggagaatacagaacctcttg 320
Query: 121 gattatgtatttattatgttggacccctcttcaaaagaaacaaaaacaaccccccaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattatgtatttattatgttggacccctcttcaaaagaaacaaaaacaaccccccaaatg 380
Query: 181 tatacaaataattttgatgtgacttcaaggggttaacttagtaggtccatttatgtcaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatacaaataattttgatgtgacttcaaggggttaacttagtaggtccatttatgtcaac 440
Query: 241 agatcttgaggtacaaaacagataattaca 270
||||||||||||||||||||||||||||||
Sbjct: 441 agatcttgaggtacaaaacagataattaca 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 670
Length adjustment: 9
Effective length of query: 261
Effective length of database: 661
Effective search space: 172521
Effective search space used: 172521
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
