Query= MSMg01no279_a16.b1 MSMg01no279_a16.b1 CHROMAT_FILE:
MSMg01no279_a16.b1 PHD_FILE: MSMg01no279_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:32 2005
(645 letters)
>mm_chr14_77477745_77478789
Length = 1045
Score = 1224 bits (633), Expect = 0.0
Identities = 636/637 (99%)
Strand = Plus / Plus
Query: 5 gaattctagagtctataaaaagtacttgtttcaacatctatttgtgacaaaaactcatgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagagtctataaaaagtacttgtttcaacatctatttgtgacaaaaactcatgg 264
Query: 65 caaattaggaataggcgacaatttcctcagtctaaaggaaaagaacatctgtgtaagaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaattaggaataggcgacaatttcctcagtctaaaggaaaagaacatctgtgtaagaac 324
Query: 125 aaccatatgcccaaggctgaaataccaagtgtttccctttagtgatcaggaacaaagcaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaccatatgcccaaggctgaaataccaagtgtttccctttagtgatcaggaacaaagcaa 384
Query: 185 gaagtttgcttttgttttattcaaagtggtatcagtaattcaaagcagtgcatcatgtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagtttgcttttgttttattcaaagtggtatcagtaattcaaagcagtgcatcatgtaa 444
Query: 245 ggagaagaaatagaatgtatacaggcagggtgaattaaactttttattttattttatttt 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 ggagaagaaatagaatgtatacaggcagggtgaattaaactttttattttcttttatttt 504
Query: 305 tacttttttaaagatttatttattattataactaagtacactgtagctgtcttcagatgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacttttttaaagatttatttattattataactaagtacactgtagctgtcttcagatgc 564
Query: 365 accagaaaaggacatcagatctcattacggatggttgtgaggcaccatgtggttgctggg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 accagaaaaggacatcagatctcattacggatggttgtgaggcaccatgtggttgctggg 624
Query: 425 atttgaactcaggacctctggaagagcgagcaatcggtgctcttaaccactgagccatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttgaactcaggacctctggaagagcgagcaatcggtgctcttaaccactgagccatct 684
Query: 485 ctccagcccgaattaaactttttaaaaagttatacttggcatagttacctttagaaaaat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctccagcccgaattaaactttttaaaaagttatacttggcatagttacctttagaaaaat 744
Query: 545 gctaaagaatgttgaaaaggctattaatatgagtaagtgaatattaaaagtaatagaata 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctaaagaatgttgaaaaggctattaatatgagtaagtgaatattaaaagtaatagaata 804
Query: 605 ctaagattaatatttgaaactatatgtatgtttatgg 641
|||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctaagattaatatttgaaactatatgtatgtttatgg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_a16.g1 MSMg01no279_a16.g1 CHROMAT_FILE:
MSMg01no279_a16.g1 PHD_FILE: MSMg01no279_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:32 2005
(572 letters)
>mm_chr14_77592287_77593259
Length = 973
Score = 855 bits (442), Expect = 0.0
Identities = 477/498 (95%), Gaps = 16/498 (3%)
Strand = Plus / Minus
Query: 1 aaaaccttctgctatatacaggatttatatatagtatatgtagaatttatgtatacagaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 498 aaaaccttctgctatatacaggatttatatacagtatatgtagaatttatgtatatagaa 439
Query: 61 ctatagtgtgca-tatttgcatatttataaagttcaaacctaattgcacgatttatattt 119
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctatagtgtgcattatttgcatatttataaagttcaaacctaattgcacgatttatattt 379
Query: 120 caaaataggcagtttgcttatacaatagtctgacttgagttgtttttatgactttttacc 179
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 378 caaaataggcagtttgcttatacaataatctgacttgagttgtttttatgactttttacc 319
Query: 180 atagggtttaaaagaaacatttttgttgaggatttgggtttgagccctaaatcaaactta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atagggtttaaaagaaacatttttgttgaggatttgggtttgagccctaaatcaaactta 259
Query: 240 ctaactcaccactataaaccttgctttctcctttatacaatgagaatgataatatccccc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 ctaactcaccactataaaccttgctttctcctttatacaatgagaatgataatatccctc 199
Query: 300 tgtcctggttgtttg---------------tttgttttgttttgttttgttttgtttttt 344
||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 198 tgtcctggttgtttgtttgttttgttttgttttgttttgttttgttttgttttgtttttt 139
Query: 345 aatcaacttgacacaagctagagttatttggggagcagaaaattaattgagaaattgtct 404
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 138 aatcaacttgacacaagctagagttatttggggagcagaaaattatttgagaaattgtct 79
Query: 405 ccatcagattgcctgtaggcaagtctgcagtgcgttttctcaattagtggtagatgtggg 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ccatcagattgcctgtaggcaagtctgcagtgcgttttctcaattagtggtagatgtggg 19
Query: 465 tgggcccagtcctcagga 482
||||||||||||||||||
Sbjct: 18 tgggcccagtcctcagga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 973
Length adjustment: 10
Effective length of query: 562
Effective length of database: 963
Effective search space: 541206
Effective search space used: 541206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
