Query= MSMg01no279_f21.b1 MSMg01no279_f21.b1 CHROMAT_FILE:
MSMg01no279_f21.b1 PHD_FILE: MSMg01no279_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:56 2005
(318 letters)
>mm_chr14_116625641_116626358
Length = 718
Score = 526 bits (272), Expect = e-154
Identities = 303/320 (94%), Gaps = 13/320 (4%)
Strand = Plus / Plus
Query: 4 ggaattcttaaaag---ataccaaagtgtctgtcatagaactggtcattcctacaaatga 60
|||||||||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 195 ggaattcttaaaagacaat--caaagggtctgtcatagaactggtcattcctacaaatga 252
Query: 61 tgccagtttcttggttaacactcagaattcttgtcttcccactcaaaggcttacaagtcc 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tgccagtttcttggttaaaactcagaattcttgtcttcccactcaaaggcttacaagtcc 312
Query: 121 caaaagagtgagcttatctttgaaatgactgtaaggttactaagaaatgtacacacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caaaagagtgagcttatctttgaaatgactgtaaggttactaagaaatgtacacacacac 372
Query: 181 acacacacacacacacacaca--------gggtggagggaggccacacaaggtgctgtga 232
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 373 acacacacacacacacacacacacacacagggtggagggaggccacacaaggtgctgtga 432
Query: 233 tagttcagcatatcataaagtgtgtgttgggtttgtactagggaaatacagtgtaagttt 292
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tagttcagcatggcataaagtgtgtgttgggtttgtactagggaaatacagtgtaagttt 492
Query: 293 tcctctgaatatatattttt 312
||||||||||||||||||||
Sbjct: 493 tcctctgaatatatattttt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_f21.g1 MSMg01no279_f21.g1 CHROMAT_FILE:
MSMg01no279_f21.g1 PHD_FILE: MSMg01no279_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:56 2005
(247 letters)
>mm_chr14_116767485_116768131
Length = 647
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Minus
Query: 5 agaaagtgccgaatggataatataaaataacttcaattcattttcccaagtggaatggct 64
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 445 agaaagtgccgaatggataatataaaataacttcaattcattttatcaagtggaatggct 386
Query: 65 taaaactatgcagatctgtatgcttatagataaagttcaggcattataagtacacttaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaactatgcagatctgtatgcttatagataaagttcaggcattataagtacacttaga 326
Query: 125 agtctattatggtctaccaagaaaacatttcatgaggtagccctaatggacttattcttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 agtctattatggtctaccaagaaaacatttcatgaggtagccctaatggacttattcagt 266
Query: 185 ataagtattacaaaaagtggctataaccaataagatctcaactggtgtaatcttcatagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ataagtattacaaaaagtggctataaccaataagatctcaactggtgtaatcttcatagt 206
Query: 245 g 245
|
Sbjct: 205 g 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|