Query= MSMg01no279_p19.b1 MSMg01no279_p19.b1 CHROMAT_FILE:
MSMg01no279_p19.b1 PHD_FILE: MSMg01no279_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:43 2005
(500 letters)
>mm_chr14_67039796_67040697
Length = 902
Score = 783 bits (405), Expect = 0.0
Identities = 476/505 (94%), Gaps = 15/505 (2%)
Strand = Plus / Minus
Query: 1 gctacacagaaaaacccagtcttgaaaaaacaaaaacaaaaaaagaaa-aagaaaa-cag 58
|||| ||||| |||||| |||| |||||||| ||||||| ||| ||| || |||| |||
Sbjct: 741 gctatacagagaaacccggtctcgaaaaaac--aaacaaacaaacaaacaa-aaaaccag 685
Query: 59 aaagcaaaaatgaagaaaataaaaataacttgaattatattctgagataaacatcctagt 118
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaagcaaaaatgaag------aaaataacttgaattatattctgagataaacatcctag- 632
Query: 119 attttactaatattcttcaatttcctgtttcaatatccactgacctggaagaacagaaca 178
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 631 attttactaatattcttcaatttcctgtttcaatatccactgacctggaagaatagaaca 572
Query: 179 gccagctgctttaggcaagacactgacagagacaagagggtgctgtgtgtcgccttaatc 238
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 571 gccagctgctttaggcaagacactggcagagacaagagggtgctgtgtgttgccttaatc 512
Query: 239 aggtcccaactcatagaaggcaatttctgaattttagccaaatgtttagatttttgcaga 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aggtcccaactcatagaaggcaatttctgaattttagccaaatgtttagatttttgcaga 452
Query: 299 gagtgcttggagatgcatgtgctctctggaaaggtcaggagggggcagagatcttatgtg 358
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 451 gagtgcttggagatgcatgtgctctctgaaaaggtcaggagggggcagagatcttatgtg 392
Query: 359 caagaaaatggaagagtctgtggggttttgttcctgggagaaaaaggagcagggtgggac 418
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 391 caagaaaatggaagagtctgtgggtttttgttcctgggagaaaagggagcagggtgggac 332
Query: 419 aaccaagggactttgagaatatggatattt---ttttttaagactgggaatctttaaaat 475
|||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 331 aaccaagggactttgagaatatggatatttaatttttttaagactaggaatctttaaaaa 272
Query: 476 tttttttattataagtaatttgtgg 500
|||||||||||||||||||||||||
Sbjct: 271 tttttttattataagtaatttgtgg 247
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 902
Length adjustment: 10
Effective length of query: 490
Effective length of database: 892
Effective search space: 437080
Effective search space used: 437080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_p19.g1 MSMg01no279_p19.g1 CHROMAT_FILE:
MSMg01no279_p19.g1 PHD_FILE: MSMg01no279_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:44 2005
(291 letters)
>mm_chr14_66936519_66937209
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 290/299 (96%), Gaps = 8/299 (2%)
Strand = Plus / Plus
Query: 1 attgaggtggtttagagtaaaaatgccaagtgctctatcttaagccctgtacaggtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaggtggtttagagtaaaaatgccaagtgctctatcttaagccctgtacaggtttct 260
Query: 61 tacatgccagttaattcttcagaaggtggcagatgctatattttgaaatcatggtttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacatgccagttaattcttcagaaggtggcagatgctatattttgaaatcatggtttctc 320
Query: 121 agtaacgaatcccagaaacaagagagagattgagaactacatggtcagaagcacaccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtaacgaatcccagaaacaagagagagattgagaactacatggtcagaagcacaccaaa 380
Query: 181 aaaaaaaaaaaaaa--------gtctccctgcagtttaacaaggacatatatgtatggtc 232
|||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aaaaaaaaaaaaaaaaaaaaaagtctccctgcagtttaacaaggacatatatttatggtc 440
Query: 233 tgggagtgtaggtctgtaattgcagttacttgaagctgaggcaggaggatcataatcgt 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggagtgtaggtctgtaattgcagttacttgaagctgaggcaggaggatcataatcgt 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
